Castanea sativa (European chestnut): 142631550
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Entry
142631550 CDS
T11266
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
csaa03110
]
142631550
Chaperones and folding catalysts [BR:
csaa03110
]
Heat shock proteins
HSP100
142631550
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
TniB
nSTAND3
AAA_7
AAA_14
ResIII
IstB_IS21
RuvB_N
NBD_SMAX1
RNA_helicase
NACHT
AAA_18
Zeta_toxin
AAA_30
ATPase_2
AAA_28
TsaE
RsgA_GTPase
AAA_25
AAA_23
Torsin
PhoH
DUF7415
Bac_DNA_binding
HerA_C
Motif
Other DBs
NCBI-GeneID:
142631550
NCBI-ProteinID:
XP_075661839
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All DBs
Position
1:61709498..61712062
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AA seq
594 aa
AA seq
DB search
MEKLSRQPFEIDVLMKYGTDLTKMAGEGKLDPVIGRQHQLERVEQILLKRRKNNPCLVGD
PGVGKTVIVEGLAQAIANATVPPKLQDKKVFAIDMGRLVAGASCRGEFEERITQLVDEVK
QSDGSIILFIDEVHTLIGAGSGIGELDAANMLKPALARGELKCIGATTQDEYRKYIEADS
ALKRRFQSVEVPEPSVDEAIEILKLICGNYETHHNVKYSEEALVAAARLSNQYISDRFLP
DKAIDLIDEAGAHVQLQNLKVLNERRVLLESDIQQIVSLWTGIPIEIVTPEESQWLLNME
NALHNRIIGQHEAIEAVSRAVRRARAGIRHPMQPIASFMFTGPTGVGKTELANALAVEYF
GSKESMIRLDMSEYMESHTVSKLFGSPPGYIGYDEGGQLTEAVRLRPHSLILFDEIEKAH
PLVFNVMLQILDDGRLTDNKGRKVDFKNAVIIMTSNIGGGFIMREHSLGFDQVKMEVAEE
LRENFRPEFLNRIDEVVLFRQLSSSEIKEIADIMLKEVSERLIKAKKIKLKVNEKVREML
VREGFNPNYGARPLRRNIVRLLEDNLAEEVLRGNIKEGDSVTIGLDDKGDIKIF
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctttcgcggcagcctttcgagatagatgttcttatgaaatatggaacagat
ttaacgaagatggcaggggagggaaagttggatcctgttataggaaggcagcatcagctg
gagcgtgtggaacaaatattgttgaaaaggagaaagaataacccatgccttgttggtgat
ccaggtgttggtaaaactgtaatcgtagaaggccttgcccaagccatagccaatgccaca
gtaccaccaaaacttcaggataagaaggtctttgccattgacatgggacgacttgtggct
ggtgcatcatgtcgtggagagtttgaggaaaggataacacagctggttgatgaagtcaaa
caaagtgatgggtcaataattctattcattgatgaggtgcacactcttattggagctggt
tcaggaataggagaactagatgctgctaacatgttaaaaccagctcttgcaagaggcgaa
ttgaagtgcataggagctacaacacaagatgaatacagaaagtacatagaggcggattca
gcattgaaaaggcgttttcaatcagtagaagtgcccgaaccctcagttgatgaggcaatc
gagattctcaagcttatatgtgggaattatgagacgcaccacaacgtgaagtattctgaa
gaggctttagttgctgctgctcgtttgtcaaatcagtatatcagtgatcgttttctgcct
gataaagcaatagacttgattgatgaagctggtgcccatgttcaacttcaaaatttgaaa
gtattaaatgaaaggagggtattgcttgagtcagacatacagcaaattgtctctttatgg
acaggtattccaattgagatagtaacaccagaagaatcccagtggcttttgaatatggaa
aatgctcttcataatcgcattataggacaacatgaagcaattgaagctgtaagtcgtgct
gtccgccgagcccgtgcaggaattagacaccccatgcagcctatagcaagcttcatgttc
actggtccaacaggggtgggaaagacagagctggccaatgcactagctgttgaatatttt
ggctcaaaagaatcaatgattaggcttgacatgagtgaatacatggagagtcatactgtt
tcaaagctttttggctctcctcctggttatattggatatgatgagggcggtcagcttaca
gaagctgttcgtcttcgaccccacagtttgatcctctttgatgagattgagaaggctcat
ccattagtcttcaatgtgatgcttcagatattggatgatggtaggttaacagataacaaa
ggacgtaaagtggacttcaaaaatgcagttattataatgacttcaaatattggtggtggc
ttcattatgagagaacattctttaggctttgaccaagtgaaaatggaagtggcagaagaa
ctaagggaaaatttcaggcctgagtttttgaataggattgatgaagtggttctgtttcgg
caactatcaagttccgagattaaggagattgcagatataatgttgaaagaagtaagtgaa
agattgatcaaggcaaagaaaataaagctcaaggtgaatgagaaggtgagggagatgttg
gtaagagaaggattcaaccccaactatggagctagaccattgaggaggaacattgtgagg
ttattggaggacaacttggctgaggaagtattaagaggaaacataaaagagggagacagc
gtgaccattggcctggatgataagggtgacataaaaattttctag
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