Castanea sativa (European chestnut): 142631827
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Entry
142631827 CDS
T11266
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142631827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142631827
03036 Chromosome and associated proteins [BR:
csaa03036
]
142631827
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142631827
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
142631827
PBAF complex
142631827
GBAF(ncBAF) complex
142631827
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142631827
NCBI-ProteinID:
XP_075662263
LinkDB
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Position
4:complement(49814720..49820459)
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AA seq
572 aa
AA seq
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MELTQRDPSSKPLRPDEPELDLYTIPSQSSWFLWDEIHDTERTELRDFFDGSSFTRTPKV
YREYRDFIINKYREEPTRRLTFTDVRKSLVGDISLLHKVFKFLEKWGLINFSANLGNSSN
VSSSSSSSLVVVEDEEDKARVKVEGTIPNAVRVGASPNSPKPISAPPIVGDSSGNAVESG
FKLPPLASYSDVFGDLVKQKGLVCGNCGGNCDSSHYKYTKGEFIICINCFKNQNYGENRS
MDEFKQIGHVENSSNQGATWTEAETLLLLESVMKHGDDWELVAQNFQNKSKLDCIAKLIE
LPFGELMLGSSHRYGNFGGLNGNKNGANPIQLSSSELHESLKIEGQSQEQINEKEQNGDA
VDECPPSKKQRITSLSDAGGSLMKQVALISTMVGPEITAAAAEAAVTALCDENSLPRETF
DVDEDHISNGICSPTTSFEQERVLQDEDSKLKETSTQSETQDTSLKSDDIPLAVRIRASI
GTALGTAAARSKLLADQEDREIENLVAIIIETQMKKLHQKIKHFDDLELIMEKEYTEIED
LKDSLLAERIEVLQRAVNAGISRWRDHFAVKS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaactgactcaacgcgacccgagttctaaaccgctccgacccgacgaaccagagctc
gacctctacaccattccaagccaatctagttggtttttgtgggacgaaatccatgatact
gagagaactgaactgagagatttctttgatggaagctcatttacaaggaccccaaaagta
tacagggaatacagggactttatcatcaataagtacagagaagagcctacgaggcggctt
actttcacggatgtccggaaatcactggtgggtgatattagtttgctacacaaggtgttt
aagttcttggagaagtgggggttgataaatttcagtgctaatttgggtaatagtagtaat
gttagtagtagtagtagtagtagtttggttgtggtggaggatgaggaggataaggctagg
gttaaggttgagggaactatcccaaatgcagttcgggtaggggcatcaccgaattcgcca
aagcctatttcagcgcccccgattgtgggggatagtagtgggaatgcggttgagagtgga
tttaaattgccaccgttggcatcgtattcagatgtttttggcgatttggtgaagcagaaa
gggttggtctgtgggaattgtggtggcaattgtgattctagtcactataaatataccaag
ggcgaattcattatttgcataaactgtttcaaaaatcaaaattatggggagaacaggtct
atggatgaattcaaacaaattgggcatgttgaaaacagtagtaatcaaggagctacgtgg
actgaggcagaaaccctacttcttttagaatcagttatgaagcatggggatgactgggag
cttgttgctcaaaattttcaaaacaaaagcaaacttgattgtatagcgaaactcattgaa
ctgccttttggagagcttatgttgggttcttcccacagatatggtaattttggtggcctc
aatggcaataagaatggtgcaaatccaattcagttatcgtcatctgagcttcatgaaagt
ctcaaaatagagggtcaatctcaagaacagataaatgaaaaagagcagaatggagatgct
gtggacgaatgtcctccttcaaagaaacagcggatcacttccctttcagatgcaggtggt
tcacttatgaaacaggtagctctcatctcaaccatggttggtccagaaatcactgctgct
gcagctgaggctgctgttacagcgctttgtgatgaaaactcattaccaagagagactttt
gacgttgatgaggatcatatttctaatgggatatgttctcccactacaagtttcgagcaa
gagagagtccttcaggatgaagattctaagctgaaggaaacgtccactcaatcagaaact
caggatacatccctaaagagtgatgatatacccctagctgtgcgaattagagcttccatt
ggaacagctcttggcacagctgctgcccgttctaaattattagctgatcaggaagacaga
gagattgaaaacttagtcgcaatcataatcgagacacagatgaaaaaattgcaccagaaa
atcaagcattttgatgatctagagctgataatggagaaggaatatactgaaattgaagat
ctaaaagattctcttttagctgagcggattgaagttttacaaagggcagttaatgctggt
atctctagatggagggatcactttgctgtaaaatcttaa
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