Castanea sativa (European chestnut): 142632034
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Entry
142632034 CDS
T11266
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142632034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142632034
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142632034
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Microp_apicomplexa_12
Motif
Other DBs
NCBI-GeneID:
142632034
NCBI-ProteinID:
XP_075662573
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Position
4:41683620..41688940
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AA seq
689 aa
AA seq
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MHSIRPLPAASPHVRRFPKTFSLRRKVPWWHQVLDPGSEIVTRWNFIFLVTSLLTLFLDP
LYFFLPVIGGPACMEIDYNLSIVVTVFRTIADLFHLLHMIMKFQTAFVAPSSRVFGRGEL
VMDRSAIAARYLKSNFIIDLAATLPLPQIVIWFVIPALKTRTADYANHTISLIVFIQYVP
RFFVIFPLHRQIIKTSGAIAKTAWAGAAYNLVLYILASHIFGASWYVLSIQRQHQCWSIE
CSKERNATRSPSCNPTFLDCSSLNNPERRFWLSVTKVLTNCDAQNDDYFQFGLFADAFTN
DVASSNIIEKYFYCLWWGLRNLSSYGQNLATSTFMGEILFSILICLAGLVLFSHLIGNMQ
NYLQSTTARLEEWRVKRRDTEEWMRHRQLPPELQERVRRFVQYKWISTRGVDEESILRSL
PLDTRRDIQRHLCLALVRRVPFFEQMDNQLLDAICERLVSSLNTKETYIVREGDPVNEML
FIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPTSSLNLPSSTRTVKSLTE
VEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACFLQVAWRRYMRRKKEME
LARQEDNYHGHVWDQEFSYWDGSNADYKDDGAGRSSVDKAQQLGATILASKFAANTRRGI
QQKADATTLQMPKLFKPEEPDFSTDQEDS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcatagcattcgccctctacccgctgcttcccctcacgtccgacgcttcccgaaaacc
ttctctctccgccgcaaggtcccatggtggcaccaagtcctcgaccctggttccgaaatc
gtgacccgatggaacttcatcttcctcgtcacctctctcctcaccttattcctcgaccct
ctctacttcttcctccccgtcattggcggccccgcctgcatggaaatcgactacaaccta
agcatcgtcgtcactgtcttcaggaccattgccgacctcttccaccttctccacatgatc
atgaagttccaaaccgcattcgtcgccccaagctcccgtgtcttcggccgcggcgaactt
gtcatggaccgctctgccattgccgcccggtatttgaagtccaacttcatcattgatctc
gccgccaccttgcctctccctcagattgtgatatggtttgtaattccagcattaaaaacc
cggacagctgattatgcgaaccacactatttctctgattgttttcatccagtatgttcct
agattttttgttattttccctttgcaccggcagattattaaaacttctggagctatagcc
aagactgcttgggcaggggcagcatacaatctcgttctctatattttagctagccatatt
tttggagcttcgtggtatgtcttatccattcagcggcagcatcagtgctggagtattgaa
tgcagcaaggagaggaatgccacacgctctccatcttgtaatcctacgtttcttgattgc
agtagcttgaacaatcctgaacgccgtttttggctgagtgtcactaaagtgctcactaat
tgtgatgctcaaaatgatgactattttcagttcggactgtttgctgatgctttcactaac
gatgttgcttcttccaatatcattgagaagtacttttattgcctctggtggggtttgagg
aatttaagttcatatggacaaaatttagcgacaagcacttttatgggtgaaatattgttc
agcattcttatttgcttagctggtcttgttctattctcacacctcataggaaacatgcag
aactatctacaatctacaacagcaagactggaagaatggagggtcaaacgaagagataca
gaggagtggatgaggcaccgtcaactgccaccagaactacaagaacgtgttcgtcggttt
gttcaatacaaatggatttccaccagaggtgtagatgaagaatccatcttgcgctcatta
cctttggacactcggcgtgatattcaaagacatctatgtctggcccttgttcgccgtgtt
cctttctttgaacaaatggataatcagctcctagatgccatatgtgaacgccttgtctca
tccttgaataccaaagaaacatacatagttcgggagggtgatccagtgaatgagatgcta
ttcatcatcagaggccaactagagagctccacaaccaatggtggaaggtcaggattcttc
aactcgattaccctcaggcctggtgacttttgtggtgaagagttactgacatgggctcta
atgcccacctctagcctcaaccttccatcctcaactcgaacagtcaagtccctaactgaa
gttgaggcatttgcactcagagctgaagacctcaagtttgttgccagtcagtttaagcgc
cttcacagcaagaaactccagcatgctttcaggtactactcccaccagtggagaacttgg
ggagcttgctttctacaagttgcatggagacggtacatgagaagaaagaaggaaatggag
ttggcaagacaagaggacaactaccatggacatgtttgggaccaagaattcagctattgg
gatggatcaaacgctgattacaaggatgatggtgctggcagatcatcagtggacaaagca
cagcaattgggagctacaatattggcctcaaagtttgcagcaaacaccagaagagggatt
caacaaaaagctgatgccaccaccttgcaaatgcccaagttgtttaagccagaagagcct
gacttctctacagaccaagaagatagttga
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