Castanea sativa (European chestnut): 142632160
Help
Entry
142632160 CDS
T11266
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00040
Pentose and glucuronate interconversions
csaa01100
Metabolic pathways
Module
csaa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142632160
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
142632160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
142632160
NCBI-ProteinID:
XP_075662687
LinkDB
All DBs
Position
4:1100032..1102367
Genome browser
AA seq
391 aa
AA seq
DB search
MAYLRSSLVLTLLSVYISIVLASPMTYNVVSLGAKADGKSDSTQAFVSAWTKACASVKPA
IIYVPVGRFYLRQLVFSGPCNNNAIIMRIAGTLVAPSDYMVLGNTGNWIVFEQVDGVTIS
GGILDGQGTGLWACKASGNSCPSGATTLEFSNSNNIVVHALTSLNSQMFHIVVNGCHNMK
MQGTRVIAAKNSPNTDGIHVQLSSSVTILNSKIKTGDDCISIGPGTTNLWIENVACGPGH
GISIGSLGKDQQEAGVQNVTVKTVTFTGTQNGVRIKSWGRPSNGFARNILFQHAVMTNVQ
NPIVIDQNYCPGNKGCPGQVSGVQISDVTYQNIHGTSATEVAVKFDCSPGNPCSRIRLEN
VKLTYKNQVAQASCSHAAGTSAGFVQPTSCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcatacctcagaagctctctagtcttaacacttctctctgtgtacatttccatagtg
ctagcttctcctatgacatacaatgtggtgagtttgggagccaaagcagatgggaaatcg
gactcgactcaggcttttgttagtgcatggacaaaagcttgtgcctcagtaaagcctgcc
attatttacgtgccagtaggaaggttctatctaaggcaattggttttcagtggaccatgc
aacaacaatgctatcattatgcgcatagctgggacccttgtggctccatctgactatatg
gtccttggaaatacaggaaactggattgtgtttgaacaagttgatggggttaccatatct
ggtggaattcttgatggccagggcactggtttgtgggcttgcaaagcctctggcaatagt
tgtccttcgggagccacgacactggaattttcaaactcaaacaacattgtggttcatgca
ttaacctccctaaacagccaaatgtttcacatagttgtcaatggctgccacaatatgaaa
atgcaaggtaccagggttattgctgccaagaacagtccaaacaccgatggaattcacgtt
caattatcttcaagtgtcacaattctcaactccaagatcaaaactggtgatgattgcatc
tcaattggccctggtaccactaacttgtggattgagaatgttgcatgtggacctgggcat
ggaattagcattgggagtctaggcaaggaccaacaagaggctggtgtacaaaacgtgaca
gtcaagacagttacttttactggtactcagaatggggtgaggattaagtcatggggaagg
cctagtaatgggtttgctaggaacattctattccaacatgccgttatgacgaatgtccag
aatcctatagtaattgaccaaaattactgccctggcaacaaaggttgccctggtcaggtt
tctggtgttcaaattagtgatgtgacataccaaaacatccatggaacatcagcaacagag
gtagctgtgaaatttgattgtagtccaggaaatccatgctccagaataagattggagaac
gtaaagctcacttacaagaatcaagtagcccaagcttcgtgtagccatgctgctggaaca
tctgctggttttgtccagcctacaagttgcttgtag
DBGET
integrated database retrieval system