Castanea sativa (European chestnut): 142632258
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Entry
142632258 CDS
T11266
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00040
Pentose and glucuronate interconversions
csaa01100
Metabolic pathways
Module
csaa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142632258
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
142632258
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
142632258
NCBI-ProteinID:
XP_075662798
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Position
4:1079112..1081687
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AA seq
391 aa
AA seq
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MAYPKSSLVIALLCMLISLVIASPMTYNVVSLGAKADGKTDSTQAFVSAWTKACASVKPA
IIYVPVGRFYLRQLVFSGPCNNNAIVMRIAGTLVAPSDYRILGNTGNWIVFEHVDGVTIS
GGILDGQGTGLWACKASGNSCPSGATTLEFSNSNNIAVNALTSLNSQMFHIVVNACHNVK
MQDVRVTAAGNSPNTDGIHVQLSSSVTILNSKIGTGDDCISIGPGTTNLWIENVACGPGH
GISIGSLGKDQQEPGVQNVTVKTATFTGTQNGVRIKSWGRSSNGFAKNIMFQHAVMTNVQ
NPIIIDQNYCPDNKGCPGQASGVKISDVTYQDIHGTSATEVAVKFDCSSRNPCSRIILEE
VKLTYKNQVAQASCSHAAGTSTGFVQPTSCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcataccccaaaagctctcttgtcattgcacttctctgtatgctcatttccttagtg
atagcttctcctatgacatacaatgtggtgagtttgggagccaaagcagatgggaaaacg
gactcgactcaggcttttgttagtgcatggacaaaagcttgtgcctcagtaaagcctgca
attatttatgtgccagttggaaggttctatctaaggcaactagttttcagtggaccatgc
aacaacaatgccatcgttatgcgcatagctgggacccttgtggctccatcagattatagg
atccttggaaatacaggaaactggattgtgtttgaacacgttgatggggttaccatatct
ggtggaattcttgatggccaaggcactggtttgtgggcttgcaaagcctctggcaatagt
tgtccttcgggagccacgacattggaattttcaaattcgaacaacattgcagtcaatgca
ttaacctccctaaacagccaaatgttccacattgtcgtcaatgcttgccacaatgtgaaa
atgcaagatgtcagggtcaccgctgccggaaacagtccaaacaccgatggaattcatgtt
caattatcttcaagtgtgacaattctcaactccaagattgggactggtgatgattgcatc
tcaattggcccgggtacaactaacttgtggattgagaatgttgcatgtggacctgggcat
ggaattagcattgggagtctaggtaaggaccagcaagagcctggggtacaaaacgtgaca
gttaaaacggctacttttactggtactcagaatggggtgaggattaagtcatggggaaga
tctagcaatgggtttgctaagaacattatgttccaacatgccgttatgacaaatgtccaa
aatcctataataattgaccaaaattattgtcctgacaacaagggatgccctggtcaggct
tctggagtaaaaattagtgatgtgacataccaagatatccatggaacatcagcaacagag
gttgctgtgaaatttgattgtagttcaagaaatccatgctctagaataattttggaggag
gtaaagctcacttacaagaatcaagtagcccaagcttcatgtagccatgctgctggaaca
tctactggttttgtccagcccacaagttgcttgtag
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