Castanea sativa (European chestnut): 142633050
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Entry
142633050 CDS
T11266
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142633050
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
142633050
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Baculo_LEF5_C
ATPD_C_fung
Motif
Other DBs
NCBI-GeneID:
142633050
NCBI-ProteinID:
XP_075663446
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All DBs
Position
4:47614530..47615198
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AA seq
222 aa
AA seq
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MAALSIEKDFGVPNRKRLIIKSGITVPNAETETEIVKKKIEHHHRQDSKLIKNSDYRESV
RKLLAEAFSRVSSETDESISPAFDPVEVAAAVESAMYERIGWSNPIKKAKYRSVLFNLKD
PKNPDLRRKVLLGEIKAETLVTMSAEEMASEKRQRENIQIKLKKLKRCVHDADEEDKATT
DMFQCSRCRERKCTYYQLQTRSADEPMTTYITCVKCNKRWKV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgagcattgaaaaagacttcggggttccaaacagaaagagactgataatc
aagtcgggtattactgttcctaatgcagaaacagaaacagaaatagtgaagaagaagatt
gaacatcatcatcgtcaagattccaagttgatcaagaactctgattatcgagagagcgtt
aggaaactgttggcagaggccttttcaagagtatcatctgaaactgatgagagcatatca
ccagcttttgacccagttgaagtggctgctgcagtcgagtctgcaatgtacgaaagaatt
gggtggtctaatccaatcaagaaggctaagtatcgatcagtcttgttcaatctcaaagac
ccaaagaacccggatttaaggcgaaaggttcttcttggagagatcaaggcggagaccctt
gtaaccatgagtgccgaagagatggctagtgagaaaaggcagcgtgagaacattcagata
aagttgaaaaagttgaagaggtgtgtgcatgatgctgatgaagaagataaggccaccact
gacatgttccagtgcagccggtgccgcgagcgcaagtgcacctactaccagttgcagacc
cggagtgccgatgaacccatgacaacttatatcacttgcgtcaaatgcaacaaacgctgg
aaggtctaa
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