Castanea sativa (European chestnut): 142633083
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Entry
142633083 CDS
T11266
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142633083
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
142633083
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
TFIIS_M
Baculo_LEF5_C
ATPD_C_fung
DUF3333
Myticin-prepro
Motif
Other DBs
NCBI-GeneID:
142633083
NCBI-ProteinID:
XP_075663471
LinkDB
All DBs
Position
4:complement(51063239..51063930)
Genome browser
AA seq
201 aa
AA seq
DB search
MTALSIEKDFGVPKRKRLIIKSGITDPKAETETETLKVTVKKKIDHHHHHHQDSKAIKNS
DYRESVRKLLAEAFSRVSSETDESISSPAFDPVEVAASVEDLQYLRRKVVLGEINAQTLV
TMSAEEMASEKRKRENIQIKLKTLKRCVHDANEEDKATTDMFQCSRCRERKCTYYQLQTR
SADEPMTTYVTCVKCSKRWKV
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgacggcactgagcattgaaaaagatttcggggttccaaaaagaaagagactgataatc
aagtcgggtattactgatcctaaggcagaaacagaaacagaaacactcaaggtaacagtg
aagaaaaagattgatcatcatcatcatcatcatcaagattccaaggcgatcaagaactct
gattatagagagagcgttaggaaactgttggcagaagccttttccagagtatcatctgaa
actgatgagagcatatcatcaccagcttttgacccagttgaagtcgctgcttcagtagag
gatctgcaatatttgaggcgaaaggttgttcttggtgagatcaatgcacagactcttgta
accatgagtgccgaggagatggccagtgagaaaaggaagcgtgagaatattcagataaag
ttgaaaacgttgaagcgatgtgtgcatgatgctaatgaagaagataaggccaccactgac
atgtttcagtgcagccggtgccgcgagcgcaagtgcacctactaccagttgcagacccgg
agtgccgatgaacccatgacaacttatgtcacttgcgtcaaatgcagcaaacgctggaag
gtctag
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