KEGG   Castanea sativa (European chestnut): 142633612
Entry
142633612         CDS       T11266                                 
Name
(RefSeq) ras-related protein RHN1-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa04144  Endocytosis
csaa04145  Phagosome
csaa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142633612
   04145 Phagosome
    142633612
   04148 Efferocytosis
    142633612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csaa04131]
    142633612
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csaa04147]
    142633612
   04031 GTP-binding proteins [BR:csaa04031]
    142633612
Membrane trafficking [BR:csaa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    142633612
 Endosome - Lysosome transport
    142633612
Exosome [BR:csaa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142633612
  Exosomal proteins of other body fluids (saliva and urine)
   142633612
  Exosomal proteins of colorectal cancer cells
   142633612
  Exosomal proteins of bladder cancer cells
   142633612
GTP-binding proteins [BR:csaa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    142633612
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase TsaE CPT Gtr1_RagA AAA_22 AAA_16 AAA_24 MMR_HSR1 ATPase
Other DBs
NCBI-GeneID: 142633612
NCBI-ProteinID: XP_075663968
LinkDB
Position
5:complement(20284558..20289224)
AA seq 200 aa
MAKPGNKIIQAKLVLLGDMGTGKTSLVLRFVKGQFFDNQEPTIGAAFFTQILSLAEATVK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISSMDTFIRAKKWVQELQRQGNQNLVMAL
VGNKSDLEAKREVETEEGDQFAQENGMLFIETSAKTSQNINDLFYEIAKRLAKANPAKSS
AMHLNNETQDKRRKILCCSV
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccaaacctggcaacaagattatacaagccaagctggtgcttctaggagacatggga
actgggaagaccagtttagtcttaagatttgttaaaggccagttttttgataatcaggaa
ccaaccattggagcagcatttttcactcagatactatccttggctgaagccacggtgaag
tttgatatatgggatacagcaggacaagagcgatatcatagcttggctcctatgtattat
cggggtgcagcggcagctgtagttgtgtatgacatatcaagcatggatacatttattcga
gctaaaaaatgggttcaagaactgcaaagacaaggaaatcaaaatctggtgatggcattg
gttggaaacaaatctgacttggaagcaaagagagaggttgagactgaggagggggaccaa
tttgctcaagaaaatgggatgcttttcattgaaacatctgcaaaaacttcacaaaacatc
aacgatctcttctatgaaatagcaaaaagactggcaaaagcaaaccccgcaaagtcaagt
gcaatgcatctaaacaatgaaactcaagataaaagaagaaaaatactttgttgttcagtt
tga

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