Castanea sativa (European chestnut): 142633616
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Entry
142633616 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142633616
KO
K04485
DNA repair protein RadA/Sms
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142633616
DNA repair and recombination proteins [BR:
csaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
142633616
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
ChlI
ATPase
DnaB_C
Zn_ribbon_LapB
AAA
AAA_22
Lon_C
AAA_16
NACHT
SLFN-g3_helicase
nSTAND_NTPase5
AAA_19
NTPase_1
nSTAND3
DAP3
AAA_5
AAA_14
AAA_29
Motif
Other DBs
NCBI-GeneID:
142633616
NCBI-ProteinID:
XP_075663974
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Position
5:15031523..15044487
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AA seq
561 aa
AA seq
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MQVSDMRAVRLILHTKTQRLHRLNPSIPNSLSSYPQFSRHFLHSTPSLHHSNSTAETAPR
AWSIYDPAPGTDGNGNAKKPNLDIVGNKKKGKARFSWVCADCGHSDGQWWGTCRQCNAIG
TLKRFSEGGSAEVSEGKTWLSPKAGELRPMRLTDVNRGINQLNWRIPLYGPFGNEVSRVL
GGGIVPGSLVLVGGDPGVGKSTLLLQIAAMIAERNDLGQPAPVVYVSGEESVEQIGNRAD
CLSIGADEIFLYSNTEIEDILGKSQPLSPRVIIVDSIQTVYLEGVAGSAGGPAQVKECTS
ALLRFAQKTNIPILLIGHVTKSGDLAGPHVLEHIVDVVLYMEGEKYSSYRLLRSLKNRFG
STDELGVFEMSQSGLQAVSNPSEMFLSDQYSDSEYLAGLAVAVIMDGSRTFLIEVQALCA
SGSTAARQVNGIQASRADMIISVLMKQTGLKLQENAIFLNVVSGVKLSETAGDLAVAAAI
CSSFLEFPIPNNIAFIGEVGLGGELRMVPRMEKRVNTVAKLGYKMCIVPKSAEKSLGSHG
FEGMEIIGCRNLKEVINTVFR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtctcagacatgagagctgtaagactcatcttacacaccaaaacccagagactg
caccgcctcaatccttcgattcccaattcactctcttcttatccccaattttcccgccac
ttccttcactccactccctctctccaccattccaactccaccgccgaaaccgcccctcgc
gcttggtctatttacgaccctgcccctggcaccgacggaaatgggaatgcgaagaagccc
aatttggacatagtcgggaacaagaagaaagggaaggcgagattctcttgggtctgcgcc
gattgcggccactccgacgggcagtggtggggcacgtgccgccagtgcaatgccattggt
accttgaagcggttttcggaaggcggatcggctgaggtttccgaggggaagacgtggctc
tcgcctaaggccggagagttgcggccgatgcggttgacggacgtcaatcgagggatcaat
cagttgaattggcgaattccactgtatggaccctttggaaatgaggtttctagggtgctt
ggtggtggtattgtaccaggttctttggttttagttggtggtgatcctggagttggcaag
agtacactgttgttgcagattgctgctatgatagctgaaaggaatgatcttggtcaacca
gcaccagttgtgtatgtttctggtgaagagagtgttgagcaaattggaaacagagctgac
tgtttgagtataggagcagatgaaattttcttatattctaatactgagattgaggacata
ttagggaaaagtcagcccctctcacctcgggttataattgtcgattcaattcaaacagtt
tatttagaaggtgtggctggaagtgctggagggcctgcacaggtgaaggaatgcacatca
gccttgctgcgttttgcgcagaagactaacatccccattcttttgattggacatgtgaca
aaatctggagatttagcaggacctcatgtcttggagcacattgttgatgttgttttatat
atggaaggggagaagtactcatcctatcgtttgcttagatctctgaagaatcgtttcgga
tccactgatgagcttggagtatttgaaatgtcacaatccgggctgcaagctgtttcaaac
cccagtgagatgtttttaagtgatcagtactcagattcagagtatttagctggactagct
gtggctgtgattatggatggatctcgaactttcctaattgaagttcaggcattatgtgca
tctgggtcaacagctgcaaggcaagttaatggcattcaagcaagcagagctgacatgatt
atttctgttctgatgaagcaaactggcctaaagcttcaagagaatgcaatctttttaaat
gttgttagtggggtgaagctgagtgagactgctggggatcttgcagtagcagcagcaatt
tgtagcagttttttggagtttcctattccaaacaatattgcattcattggtgaagttgga
cttggtggtgagcttcgcatggtacctagaatggagaaaagggtaaacacagtggcaaaa
ctgggctataaaatgtgtattgttcccaaatcagccgagaaatctttaggatctcatggt
tttgaaggaatggaaatcataggctgcaggaatctgaaagaagttattaacactgtgttc
aggtga
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