Castanea sativa (European chestnut): 142633654
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Entry
142633654 CDS
T11266
Name
(RefSeq) putative polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00040
Pentose and glucuronate interconversions
csaa01100
Metabolic pathways
Module
csaa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142633654
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
142633654
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
142633654
NCBI-ProteinID:
XP_075664013
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Position
1:71595858..71602328
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AA seq
440 aa
AA seq
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MAKFLLCVLVFALCFVSTQSRPIFIDSRKVYNVVDYGAVGDGLVDDTKVRLMDFAVFAYE
VYDMVNYVVLPFMDAWKATCKSSMSSPTMHVPQGMTFLLQPLTFNGNCKSNNITVQIDGT
IIAPSDPSAWKCPDDKCDIWIEFHDFKGLLIRGSGTINGQGTKWWGLKCKQNKRVCGRKP
TGFVIGGSNNVHIDGLTFEDSPKMHIAFERSEWVNATSLTIQAPKHSPNTDGIHIQHSKN
IIIYNTSIGTGDDCISIGDGSSHINISNIDCGPGHGISIGSLGKDGKHETVEFVHVKDVS
FTGTTNGARIKTWQGGKGHARNITFEHITSIDSARPIIIDQYYCDHKVHKHCGNETSAVR
VSNIVYDQIYGTSDKEIAVEFSCSKSVPCYNIVMRNISLHSTEDGTQTSSICQNVRGLRN
GDIIPDVPCLNEAENLPIVN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtttctactatgtgttcttgtttttgctttatgttttgtatcaacacaatcc
cgtcccatcttcattgattcaagaaaggtttataacgtggttgattatggagctgtagga
gatggacttgttgatgataccaaggttagactaatggactttgcagtctttgcttatgag
gtttatgatatggttaattatgttgtattgccttttatggatgcttggaaagctacatgc
aaatcttcaatgtcttcccccaccatgcatgttcctcaagggatgacttttttgctccaa
cccttgaccttcaatggcaattgcaaatccaataatatcactgtccagattgacggcact
ataattgcaccaagtgatccttctgcatggaaatgccctgatgacaaatgcgatatatgg
atcgaattccatgacttcaagggtctccttatccgtggatctggtactatcaatggacag
ggaacaaagtggtggggtctgaaatgcaaacaaaataaaagagtttgtggcaggaaacca
actggttttgtaataggaggctccaacaatgtgcacattgatggcctaacctttgaggac
agtccaaaaatgcacattgcttttgaaaggtcagaatgggtgaatgctacttctctcact
atccaagcccctaagcatagccctaacaccgatggaattcatatccaacattccaaaaac
atcatcatatacaacactagcattgggaccggtgatgactgtatttcgattggtgatggc
tcgtcccacatcaacatcagcaatattgattgtgggccaggtcatggaataagcattgga
agtctgggtaaggatggaaagcatgaaacagtagagtttgttcatgtcaaggatgtctct
ttcacgggaaccacaaatggagctagaataaagacatggcagggagggaaaggacatgca
agaaatataacctttgagcatatcacatctattgattcagctcgtcctatcatcattgat
caatattactgtgaccacaaggttcacaagcactgtggaaatgaaacatcggcggttcgt
gttagtaatattgtgtacgatcaaatatatgggacatcagataaagaaattgccgtggaa
ttttcatgtagcaagtcagttccatgctacaacattgtaatgaggaacataagtttgcac
tcgactgaagatggaacgcagacttcatctatatgccagaatgttagaggacttagaaat
ggtgatataattccagatgtaccttgcctcaatgaagctgagaatttaccaatagtgaat
taa
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