Castanea sativa (European chestnut): 142633803
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Entry
142633803 CDS
T11266
Name
(RefSeq) tRNase Z TRZ3, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csaa03016
]
142633803
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
142633803
Transfer RNA biogenesis [BR:
csaa03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
142633803
Prokaryotic type
142633803
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
142633803
NCBI-ProteinID:
XP_075664166
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Position
5:complement(17051481..17058076)
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AA seq
992 aa
AA seq
DB search
MPLPQVSSLNLNLRLLFPLLSPFKPTSLSYLKPINHSSSLFTVLASSKRHRNVPPSHHLK
PNLARRNTSTLSNRDQQKVAPMETTTEPQPSVGFNKRRAEGRDKNDKPHKNLQLKVRKLN
PVNTISYVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFL
SRVCSETAGGLPGLLLTLAGMGDEGMSVNVWGPSDLKYLVDAMKSFIPNAAMVHTRSFGP
MLSSDTASMPDSSQFQEPIVLIDDEVVKISAILLQPSCSDGSPRLNEEPVMQNPSERGLD
ERMDPNGKAGSIMKPGDMSVIYVCELPEIKGKFDPAKAMSLGLKPGPKYRELQLGNSVKS
DRQNIMVHPSDVMGPSVPGPIVLLVDCPTESHLQELLSIQSLSSYYVDALDNIPDSAKTV
TCIIHLSPASVIRGSNYQRWMQRFGSAQHILAGHEMKNVAIPILKSSARIAARLNYLCPQ
FFPAPGFWSLQQLNYSAPESSASSEGSVPKLCESIAAKNLLKFTLRPYAHLGLDRSGIPN
SATPTEIIDELVTEIPEIVDAAQCVSQFWHGSRETEETTSLQDKKVFVEEPWLNENSLPS
CLENIRRDDLEIVLLGTGSSQPSKYRNVSSIFINLFTKGSLLLDCGEGTLGQLKRRYGVE
GADDAVRHLRCIWISHIHADHHTGLARILALRRDLLQAVPHEPLVVVGPRQLKRYLDAYQ
RLEDLDMQFLDCKHTTAASLDAFEGFIKSNKDHSSPESPINAEDMTNKILDGSTGQNIDC
TLFARGSQMQSYWKRPGSPVDNRMALPILKTLKKALSEAGLEALVSFPVVHCPQAFGVAL
KAAERINSIGKVIPGWKIVYSGDTRPCPELIEASRGATVLIHEATFEDGMVDEAIARNHS
TTMEAIEVGDSAGAYRIILTHFSQRYPKIPIFDETHMHKTCIAFDMMSVNIADLPVLPKV
LPYLKLLFKNEMIVDESEDIVDDAVEAVHVGS
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgccattgccccaagtctcaagcctcaacctcaatctccgcctcctcttccctcttctt
tctccctttaaacccacttctctctcctaccttaaacccatcaaccattcttcttctctc
ttcaccgttctcgcctcctctaaacgacaccgtaacgttcctccttctcatcacctcaaa
cccaatcttgctcgcagaaacaccagcactctgagcaacagagaccaacaaaaagtggct
ccaatggaaacaacaactgagcctcagccttctgttgggttcaataagagaagggctgaa
ggtagagacaagaatgataaaccccacaagaacttgcagttgaaagtgcgcaagctcaac
cctgtgaataccatttcttatgtgcagatattggggacaggaatggatactcaggataca
tcaccttcagtcttacttttctttgacaagcaaagatttattttcaatgctggagaggga
ttgcaaagattctgcacagagcataagattaagttatcaaagatagatcacatatttctc
tctcgtgtctgctcagagactgcgggtggtcttccaggtttactattgactttggctggc
atgggagacgaaggaatgtctgtcaatgtttggggtccatcagatctcaagtatctagtt
gatgccatgaagtctttcatcccaaatgctgccatggttcacactcggagctttgggccc
atgttaagttctgatactgcttctatgcctgattcaagtcagtttcaagaacccattgtt
ctcattgatgatgaggttgtcaagatatcagccattctcctacaaccaagttgctcagat
gggtctccacgcttgaatgaagaacctgtcatgcagaatccttcagaaaggggtctagat
gagagaatggatccaaatggaaaagcagggtctataatgaagcctggtgatatgtctgtg
atatatgtctgtgaattgcctgagattaaggggaaatttgacccagccaaagctatgtct
cttggccttaaacctggcccaaagtaccgggaactacaactcggaaattcagtgaagtca
gatcgccaaaatatcatggttcatccaagtgatgtaatgggtccttctgttcctgggccc
attgtactccttgttgactgccccacagaatctcacttgcaggagttgttgtctatacaa
tctctcagtagttactatgtagatgccttggacaatataccagatagtgctaagactgtt
acttgtatcattcatttaagtcctgcatctgtaataagaggttcaaattatcagagatgg
atgcaaagatttggttcagcccaacacatcctagctgggcatgaaatgaagaatgtggca
attccaattcttaaatcaagtgcacgaattgcagcacgtctcaattacttgtgccctcag
tttttcccagctccaggtttttggtctcttcagcagcttaattactcagcaccagagtcc
agtgcttcaagtgagggttcagttccaaagctgtgtgaaagcattgctgccaaaaatctc
ctcaagttcactttgcgtccttatgctcaccttgggttggatagatctggtattccaaat
tcagcgactcccacagaaatcattgatgagttagtgacggagattccagagattgtagat
gctgcccaatgtgtcagtcagttctggcatgggtccagagagacagaggagacaacttcc
ttgcaagataaaaaagtttttgttgaagagccatggttgaatgagaattctcttcctagc
tgtttggagaatataagaagagatgacttagagattgttcttcttggaactggttcatcc
cagccttcaaaataccgtaatgttagttcaatcttcattaatcttttcacaaaaggaagt
ttgctcttagattgtggtgaaggaaccctaggacagctgaaaaggagatatggtgtagag
ggtgcagacgatgctgtgagacatctaaggtgtatttggatttctcacattcacgctgat
caccacacgggtttggcaagaatacttgctctgcggcgtgatctgttacaggcagtgcct
catgaaccattagttgttgtaggcccaaggcagcttaagagatatttagatgcataccaa
agacttgaagatttagatatgcagttccttgattgtaagcacactacagcagcttcattg
gatgcttttgagggttttattaaatcaaataaagatcactcttctccagaaagtccaatt
aatgctgaggatatgaccaataaaattttagatggctcaacaggacagaatattgattgt
actctgtttgccagaggatcccaaatgcagagctattggaagagaccaggtagtccagtt
gataataggatggctttgccaatcctaaagaccttgaagaaagcactaagtgaagctggt
ttagaggccttggttagttttcccgtcgtgcactgtccacaggcatttggtgttgcattg
aaggcagcagagagaatcaatagcattggaaaagtgataccagggtggaagattgtatac
tcgggcgataccaggccctgcccagaattgatagaagcatcccgtggtgcaacagttctt
atacatgaggctacttttgaggatggtatggtggatgaggctatagcaagaaaccatagc
acaacaatggaagcaatcgaagttggggactctgctggtgcgtaccgcattatacttacc
cacttcagccagagatatccaaaaattcctatatttgatgagacacacatgcataagact
tgcattgcgtttgacatgatgagtgttaatatagcagatttgccagtacttccaaaggtt
cttccatacttaaaactgctttttaaaaatgagatgatagttgatgagtctgaggatatt
gtagatgatgctgttgaggctgtacatgtaggttcataa
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