Castanea sativa (European chestnut): 142634146
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Entry
142634146 CDS
T11266
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142634146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142634146
03110 Chaperones and folding catalysts [BR:
csaa03110
]
142634146
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142634146
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142634146
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142634146
Messenger RNA biogenesis [BR:
csaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142634146
Chaperones and folding catalysts [BR:
csaa03110
]
Heat shock proteins
HSP60 / Chaperonin
142634146
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142634146
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142634146
Exosomal proteins of other body fluids (saliva and urine)
142634146
Exosomal proteins of breast cancer cells
142634146
Exosomal proteins of colorectal cancer cells
142634146
Exosomal proteins of bladder cancer cells
142634146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF763
Motif
Other DBs
NCBI-GeneID:
142634146
NCBI-ProteinID:
XP_075664539
LinkDB
All DBs
Position
5:complement(10662444..10671415)
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AA seq
574 aa
AA seq
DB search
MHRIVSKLASSITSSTSRKVVCSRVVCNRNYVAKAINFGVGARAAMLQGVSEVAEAVKVT
MGPKGRNVIIERSHKDPQVTKDGVTVAKSISFKEKAKNVGADLVKQVAIATNTAAGDGTT
CATVLTQAILIEGCKSVAAGVNVMDLRSGINMAVDAVLSDLKSKALMISTSEEIKQVATI
SANGESEIGDLIARAMEKVGKEGVITVSDGNTMDNELEVVEGMKLARGYISPYFVTDHKT
QKCELENPLILIYDKKISDMNSLVRILELAVQKKRALLVVAEDVESDALSMLVLNKHHAG
LKVCAIKAPGFGENRRANLDDLAILTGGEVITEDRGLTLDKVQFEMLGTAKKVSVSLDDT
IILHGGGDKKLIEERCAELRTAMEKSDAVFDKEKAQERLSKLSGGVAVFKVGGSSEAEVE
ERKDRVTDALNATRAAVEEGIVPGGGVALLYAAKGLESLPTINEDQKTGVKIIQNALKAP
AFIIASNAGFDGALVIGKLLEQDNHNLGFDAAKGVYVDMVEERIIDPLKVVRTALVDATS
ISLLLTTSEATVFDHPNEKNKPPSRMPNMDQMPY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaatagtttcaaaattagcttcatcgatcacttcctctacttcaagaaaagtt
gtgtgtagcagagttgtctgcaatagaaattatgttgccaaggctattaattttggggtc
ggggctcgggccgcaatgctgcaaggcgtttctgaggttgcagaagctgtaaaagtcaca
atgggaccaaagggccgcaatgtgataattgagcgaagtcataaagatcctcaagtcaca
aaggatggtgttactgttgcaaaaagtatcagctttaaggaaaaagccaaaaatgttggt
gcagatcttgtaaagcaggttgcaattgctactaatactgctgctggagatggtactact
tgtgcaactgtcctaactcaggcaatactcattgaagggtgcaagtcagtagctgccggt
gtgaatgtgatggatttgcggagtggcattaatatggcagtcgatgccgttttatctgat
ctgaaaagcaaagcattgatgataagcacatcagaagaaattaagcaggttgcaactatt
tcagcaaatggtgaaagtgagattggagatcttatagctagagcaatggagaaagttgga
aaggaaggagtcattactgtctctgatgggaatacgatggataatgagttagaagtggtg
gaaggaatgaagctagccagaggctacatatctccttattttgttactgatcataagacc
cagaaatgtgaactagagaaccccctgatcctcatttatgacaagaaaatttcagacatg
aattcacttgttagaatattggagctagcagtacagaaaaaaagagcactacttgttgtg
gccgaggatgttgaaagtgatgcactttctatgcttgtactcaataagcatcatgctggg
cttaaggtttgtgcgatcaaagctcctggttttggggaaaatagaagagcaaacttagat
gatcttgccattcttactgggggagaggttatcactgaagaccgtggtttaacccttgac
aaagtgcaatttgaaatgcttggaactgcaaaaaaggtgtctgtctctcttgatgacaca
ataattctacatgggggtggggataagaagctgattgaagaaagatgtgcagagctgagg
acagctatggagaagagtgatgccgtgtttgacaaggagaaagcacaggaaaggctatca
aagctgtctggtggtgtggctgttttcaaggttggagggtctagtgaggcagaagttgag
gaaaggaaggatagggtcacggatgctttaaacgctacaagagcggctgtggaagagggt
attgtgccaggtggtggtgttgctcttttgtatgctgcaaaaggtttggaaagccttcca
acgataaatgaagaccagaaaacaggcgtaaagataatccaaaatgctctaaaggcacct
gcattcataatagcctcaaatgctggttttgacggtgcactggttattggcaaattgttg
gaacaagataatcataatttgggttttgatgctgctaaaggtgtatatgttgacatggtg
gaggagagaatcatagatcctctcaaagtggttagaacggctttagtcgacgctaccagt
atctcattgcttctgacaacaagtgaggcaactgtatttgatcatccaaatgagaaaaac
aaacctccgagccgtatgccaaatatggatcagatgccctattag
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