Castanea sativa (European chestnut): 142636074
Help
Entry
142636074 CDS
T11266
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142636074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csaa03009
]
142636074
Ribosome biogenesis [BR:
csaa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
142636074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_14
AAA_2
TIP49
AAA_16
AAA_22
RNA_helicase
AAA_28
AAA_17
nSTAND3
NPHP3_N
AAA_33
AAA_18
Nucleolin_bd
Rad17
Parvo_NS1
IstB_IS21
AAA_3
Mg_chelatase
Bac_DnaA
Viral_helicase1
TsaE
NACHT
Vps4_C
Cytidylate_kin2
Motif
Other DBs
NCBI-GeneID:
142636074
NCBI-ProteinID:
XP_075666266
LinkDB
All DBs
Position
5:66002552..66014804
Genome browser
AA seq
738 aa
AA seq
DB search
MKRELLRRRLESYSNHRSSSLDETVDHLRATYRDYNRIKRQPFTTFVRKTLQSLPSQNTT
TTTTKKKKKRKRLLETTSSDENSSSSSSDEEDDGAVVSTSEDTPPKFDVMKSNLLASYME
LSEAKKVDSNKEVEEYRVDEVKMVVKKGGDGGGNDGPRFRDLGGMDSVIEELKMEVIVPL
YHPQLPQWLGVKPMGGILLRGPPGCGKTKLAHAIANETGVPFYKISATEIVTGVSGASEE
NIRDLFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDESHRLVQPADA
NSNSESSDQRPGHVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDESARVKILSVITRN
LRLEGSFNLLKIARSTPGFVGADLTAVANKAGNLAMKRIIDERKSELSKDSINEEHTEEW
WRQPWSPEEMEKLTITMADFEEAVKMVQPSSKREGFSTIPNVKWEDVGGLDFLRKEFDRY
IVRRIKYPEDYEGFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYV
GESELAVRTLFSRARTCSPCILFFDEVDALATKRGKEGGWVVERLLNQLLIELDGAEQRR
GVFVIGATNRPGVMDRAILRPGRFGKLLYVPLPSPDERGLILKALGRKKPIDASVDLSAL
GRMEACENFSGADLAALMNEAAMVALEDKLTSTKSTSDAAPCTIKSTHFERALGKISPSV
SGKQKRDYQTWSESFKAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagaattactccgtcggcggctggaaagctacagcaaccaccgttcctcatcg
ctggatgaaaccgtcgaccatctccgtgcaacctaccgcgactacaaccgtatcaagaga
caacccttcacaaccttcgttcgcaaaaccctacaatccctcccttctcaaaacaccacc
accaccaccaccaaaaagaagaaaaagcgaaagagacttctcgaaacgacgtcgtctgac
gagaactcctcgagtagtagttccgatgaagaagacgacggtgcggtggtctccacatcg
gaagacactccgccgaaattcgatgtcatgaaatcgaacctattagcgtcgtatatggag
ctgagcgaggccaaaaaggttgatagcaataaagaagttgaggaatacagggttgatgag
gttaagatggtggtgaagaaaggcggagacggaggcggaaacgatggccccaggtttagg
gatttgggaggaatggatagtgtgattgaggagttgaagatggaggtgattgtgcctctg
taccatccgcagctgccgcagtggttaggggttaagcctatgggtgggatcttgttgcgc
gggccacccgggtgtgggaagaccaaattggctcacgccattgccaatgagaccggtgtt
cccttctataagatttccgctaccgagattgtcactggtgtctccggtgcatcggaggaa
aatattcgagatcttttttctaaagcatacaggactgccccatcaattgtatttattgac
gaaattgatgcaattgcttctaaaagagaaaatttacaacgagagatggagcgaagaatt
gtgacacagttgatgacttgcatggatgaatctcacagacttgtacaaccagcagatgct
aattcaaactcagaaagttctgatcagagacctggccatgtgcttgtcattggagcgacc
aataggcctgatgctgttgaccctgcactaaggagacctgggcgatttgaccgtgagatt
gtcctaggtgttcccgatgaaagtgcaagggttaagattctttctgtaattacacgcaat
cttagactggaaggttctttcaaccttctgaaaatagctaggtctacgcctggttttgtt
ggggctgatttgactgccgtggctaacaaggctggcaaccttgccatgaagagaattatt
gatgaaagaaagtctgagctatcaaaagactctataaatgaagaacatactgaagagtgg
tggaggcaaccatggtcgcctgaggagatggaaaagcttaccatcacaatggctgatttt
gaggaagcagttaaaatggttcagccctcgtcaaaaagagaaggattctctaccattcct
aatgtaaagtgggaagatgttggtgggcttgactttttaagaaaggagtttgaccgttat
atagttagacgtataaaatatccagaggattatgagggatttggagtagacttagagaca
ggatttttgctctatgggcctccaggttgtggtaaaacactgattgcaaaggctgtggct
aatgaggcaggggccaatttcattcacatcaagggtcctgaacttttgaataaatatgtt
ggagaaagtgagctggcagttcggacattattcagtcgtgcaaggacatgttcaccatgc
atacttttctttgatgaggtggatgctttggcaacaaagcgtggtaaagaaggcggatgg
gttgttgagcggctactgaaccagttacttatagaactagatggagcagagcagcggcgg
ggtgtttttgttattggcgcgacaaatagacctggggtgatggacagagccatcttacgg
cctggtagatttggtaaacttctttatgttccgttgcccagcccggatgagcgtgggttg
atcttaaaagctcttgggagaaagaagcctatagatgccagtgtggatttgagtgctctt
ggtcgaatggaagcttgtgaaaattttagtggggctgatcttgctgcactgatgaatgaa
gctgcaatggttgctcttgaagacaaactgacgtcaactaagagcacctcagatgcagct
ccttgtaccataaaatcaacacattttgagcgagcactgggtaaaatctcaccttctgtc
tcaggcaagcaaaaacgagattaccagacttggtcagagagttttaaggcagcatga
DBGET
integrated database retrieval system
