Castanea sativa (European chestnut): 142636309
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Entry
142636309 CDS
T11266
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03015
mRNA surveillance pathway
csaa04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142636309
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142636309
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csaa01009
]
142636309
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142636309
03036 Chromosome and associated proteins [BR:
csaa03036
]
142636309
Protein phosphatases and associated proteins [BR:
csaa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
142636309
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
142636309
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
142636309
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
142636309
NCBI-ProteinID:
XP_075666602
LinkDB
All DBs
Position
5
Genome browser
AA seq
516 aa
AA seq
DB search
MNGGDEVVAAPVDPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRGG
RVVLFERTDTKDHGGSRRDLERLDYPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANGALFLLSTNDKTIKFWKVQEKKIKKISDMNLDSSKAVGNCSVASSSNSLSPR
PYLANGGCPDRSYSSLSNELSFPPGGIPSLRLPMVVASHETSLVARCRRVYAHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPSHCNM
LGYSSSKGSIRLIDLRQSALCDSHAKLFEEPEPAGTRSFFTEIIASISDIKFGKDGRYIL
SRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGS
YSNLFRVFGSSPGSTEATTLEASKNPMRRQVQAPSRPSRSLSSSLTRVVRRGAESPGVDA
NGNSFDFTTKLLHLAWHPSEKSIACAAANSLYMYYA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatgaggtcgtcgcagctccggtggacccacctcagcctctggagtgg
aaattctctcaggtttttggagaacgcaccgctggtgaagaagttcaggaagttgatatc
atttcagcaatcgaatttgacaaaacgggtgaccatcttgctactggtgaccgtgggggc
cgggtggtactctttgagaggacagatacgaaagatcatggtggctctagaagggatttg
gagaggttggattatccaattagtaggcatcctgagttccgttataaaacagagtttcag
agccatgaacctgagtttgactatctcaagagcttggaaattgaggagaaaatcaacaaa
attagatggtgtcaaacagccaacggggctttatttcttctttccacaaatgacaaaaca
attaaattttggaaggtccaagaaaagaagatcaagaaaatatctgacatgaatttggac
tcttcaaaagctgttggaaattgcagtgttgctagttcgagtaattcacttagccctaga
ccttaccttgcaaatggaggatgcccagacagatcatacagttctctgagcaatgagctc
tcattcccacctgggggcattccttcactacgtttacccatggtagtagctagccatgaa
accagccttgtagctagatgtcgaagggtatatgcacatgctcatgattatcatatcaat
tccatttcaaataacagtgatggtgaaacttttatatctgcggatgatcttcgaataaat
ctttggaacttggaaattagcaatcagagttttaatattgtggatgtgaaacctgcaaac
atggaggatctgactgaggtgataacttcagcagaattccaccctagccattgcaatatg
ttaggatatagcagctccaaaggttcaatccgcctcattgatttgcggcaatcagcttta
tgtgattctcatgccaaattgtttgaggaaccagagccagctggtactagatcatttttc
accgagataattgcttcaatctcagatattaaatttggaaaggatggaagatatatactt
agtcgtgattacatgactcttaagttatgggacattaatatggattcaggtccagtttcg
accttccaggttcatgaatatttaagaccaaagctgtgtgatttatatgaaaatgattca
atctttgataaatttgagtgttgtttgagcggtgatggattacgagtagcaacaggttct
tacagcaatttattccgtgtgtttggttcctcccctggaagtactgaggcaacaactttg
gaagccagcaaaaatcctatgaggcgacaagttcaggccccttcaaggccttccagatcc
ttgagcagtagtttaacaagagttgtcagacgaggagcagaaagccctggggttgatgca
aatggaaattcatttgattttacaactaagttgctgcacctagcatggcacccaagtgaa
aaatcaattgcctgtgctgctgccaacagcttgtacatgtactatgcataa
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