Castanea sativa (European chestnut): 142636326
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Entry
142636326 CDS
T11266
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csaa03032
]
142636326
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142636326
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
142636326
DNA replication proteins [BR:
csaa03032
]
Prokaryotic type
DNA Topoisomerases
142636326
DNA repair and recombination proteins [BR:
csaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
142636326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
142636326
NCBI-ProteinID:
XP_075666626
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All DBs
Position
5:24856310..24905106
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AA seq
960 aa
AA seq
DB search
MKPSFPPPSSSSAYPSTMAFSSGLRFSTILLRHRPCSLLTAPTRFSLSSRLRHSLLDLRF
LSTASSSSSKSVVKAARRSGGGDDDDGGGGNGSVLVKGRVGNDDGGDGDGGGRIVPFELH
REATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVL
GKFHPHGDSAVYDSLVRMAQDFSLRCPLINGHGNFGSIDADPAAAMRYTECRLEALTEAM
LLADLEQDTVDFVPNFDNSQKEPSVLPARLPTVLLNGASGIAVGMATNIPPHNLGELVDV
LCALIHNPEATLQELLEYMPGPDFPTGGLIMGNIGILEAYRSGRGRVTVRGKTDVELLDS
KTKRTAIIIKEVPYQTNKSSLVEKIAELVENKSLDGISDIRDESDRTGMRIVIELKRGSD
PSIVLNNLYRLTSLQSGFSCNMVGILDGQPKQMGLKELLQAFLDFRCSVVERRARFKLSQ
AQERRHIVEGIVVGLDNLDGVIRIIREASSNAIASVGLRNEFNLSEKQAEAILDISLRRL
TLLEGKKFVDESKSLMEQISKLEELLSSKRHILQVIEQEAIELKNKFSSPRRSMLEDTDS
GQLEDIDVIPNEEMLLVLSEKGYVKRMKPNTFNLQTRGTIGKSIGKLRVNDATSEFIVCR
AHDHILYFSDKGIVYSARAYKISECTRTAAGTPLVQILSISDGERITSVIPVSEFSGDQF
LLMLTMNGYVKKVSLNSFSSIRSTGIIAIQLVPGDELKWVRCCTNDNLVAMASQNGLVNL
CSCENIRTQGRNTRGAAAMRLKQGDMMASMDIIPAAKLNDLKKVSEANTSSAKSLNGPWL
LFVSESGFGKRVPLSSFRASPLNRVGLIGYKFSAEDRLAAVFVVGFSLSDDGESDEQVVL
VSQSGTVNRIKVRDVSIQSRYARGVILMRLDHAGKIQSASLISATEAEPEEEAQAAAVHG
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcctttcctcctccttcttcttcttctgcttatccttccacaatggctttc
tcttcaggactccgcttctccacaatcctcctccgccaccgcccttgctctctcttaacc
gctccgacccgcttctccttatcctcaaggctccgccacagcctcttggacctccgtttt
ctctccaccgcctcctcctcctcctctaagtcggtggtgaaagctgccagacgcagcggc
ggcggggacgacgacgacggcggcggcgggaacggcagcgtcttggtgaagggcagagtc
ggaaatgacgacggcggtgatggagatggcggagggagaatcgtgccatttgagctacac
agggaagccaccgaggcatacatgtcctacgccatgtcagtcctcctcggccgtgctctg
cccgacgttcgcgacggtcttaaacccgtccatcgccgaatcctatttgcaatgcatgaa
ttgggcctttcatctcggaaaccattcaagaaatgtgctagagttgttggagaggttcta
ggaaaatttcacccgcatggagactctgctgtctacgattccttagtgcgaatggcacag
gatttctccttacgatgtccacttataaatgggcatgggaattttggttcaatagatgca
gatccagctgctgccatgcgttacacagagtgtagattggaagcgctcacagaagcaatg
ttattggcagatctagaacaagacactgttgactttgttccaaactttgataattcacaa
aaagaaccatctgttcttcctgctcggcttccaactgtattgttgaatggtgcttctggg
attgcggttggcatggcaaccaacatccctcctcataatcttggggagttggtagatgtg
ctctgtgcactgattcataatcctgaagctacattgcaagagttgttggaatacatgcct
ggacctgactttccaactggtggactcattatgggaaacattggcattttagaggcatat
cgtagtgggcgtggacgtgtaacagtcagagggaaaactgatgttgaattgcttgattca
aaaacaaaacgtactgccattatcataaaagaggtcccttatcagaccaacaaatcttcc
cttgtggagaagatagctgaacttgtggaaaacaagagtttagatggaattagcgatatt
cgggatgagagtgatcgaaccggaatgcgtatagtcattgagctaaaacggggatcagac
ccatcgattgtcctgaataatctttatcgtctcacatcacttcagtctggtttcagctgc
aacatggttggaattcttgatggacaaccgaaacagatgggtctaaaggaactgctacag
gcattcttagattttagatgctctgttgttgagagacgtgctaggtttaagctttcacaa
gcacaggaaagacgacatattgttgagggtattgttgtggggcttgataatttggatgga
gtgattcgtataataagggaagcttcaagcaatgcaattgcatcggttggtttaaggaat
gagtttaatctttcagagaaacaagcagaggctattcttgacattagcctaagaagactc
accctacttgaggggaaaaagtttgttgatgaaagtaaatccttgatggaacaaatctcc
aaattagaggagcttttatcaagcaagaggcacatattacaggtaattgagcaagaagca
attgagctgaaaaacaagttttccagtccaaggcgttcaatgttggaggacactgatagt
ggccaacttgaagacatagatgttattccaaatgaagaaatgcttttggtgcttagtgaa
aagggttatgttaagcggatgaagcctaatacctttaatcttcaaactcgtggaacaatt
ggtaaatccattggaaagctgagagtaaatgatgcaacatcagagtttattgtttgtcgt
gcacatgaccatatcctgtatttcagtgataagggaatagtgtactcagctcgtgcatat
aaaatttcagaatgcacccgaactgctgctggcaccccacttgttcagatcttatcaata
tctgatggtgaacgaataacatccgttattcctgtgagtgaattttctggagatcaattc
ttactgatgcttacaatgaatggctatgtcaagaaagtatctttgaactcattctcatcg
atcaggtcaacaggaatcattgcaattcaattggttcctggtgatgagctaaagtgggtc
cgttgttgtacaaatgataaccttgtggccatggcttcacagaatggattggtcaatcta
tgttcctgtgagaatattcgaacacaaggcagaaatactagaggcgcagcggctatgaga
ctaaaacaaggggatatgatggcaagcatggacattatacctgcagctaagctaaatgac
ttgaaaaaggtgtcagaagctaacacaagcagtgctaaaagcctcaatggcccgtggctg
ttgtttgtgtctgaaagtggttttggaaagcgtgtgcccttgagctcctttcgtgcatca
cctttaaatagagttggtttaataggatacaagttttcggcggaggaccgtttggcagca
gtctttgtggttggattttcattgtcagatgatggtgaaagtgatgaacaagtggttctc
gttagccaaagtggtacagtcaacagaattaaggttcgggatgtttcaatacagtctcgc
tatgcaaggggagtaattttaatgcggctggatcatgcgggaaagattcagtctgcatca
ctaatctccgcaacagaggctgagcctgaggaagaagctcaagctgctgcagttcatggc
tga
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