Castanea sativa (European chestnut): 142636329
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Entry
142636329 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142636329
KO
K17925
sorting nexin-13
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csaa04990
]
142636329
Domain-containing proteins not elsewhere classified [BR:
csaa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
142636329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
142636329
NCBI-ProteinID:
XP_075666632
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Position
5:19459096..19469945
Genome browser
AA seq
1110 aa
AA seq
DB search
MSTQQRQHVNVRDLAEEAKKRVVVLIICVVGLSYLMSLTSSSVWVNLPAAASLIIGLRYL
SLDFDMRRKAAAYNSKPSSNTASHKKPLEHPKIVEKSEWRRKVNSPVVEDAIDHFTRHLV
SEWISDLWYSRLTPDKEGPEELVNIMNGALGEISGRMRNINLIDLLTRDLVNLICTHLEL
FRANQAKIERQNSGPLTIEQRDVHLRRILANEDKLHPALFSAEAEHKVLQHLMDGLIPLT
FKPEDLQCLFFRYIGRELLASAVMRPVFNLASPKFINERIEVLVLKMTKANKGFSMTQGA
SQSKPEESSRIPSDHFSRFLDPTVTGVELVQLKTNQSRTAANTSVTDHVNGNLSKDPLLS
VDARSTRSWNSLPFNSQTSEETGIQHQRSGGEWGDMLDLISRRKTQALAPEHFENMWAKG
RNYRKKEGENRVIEQVPQNSSPGKSVKVDHSKAISKPKENTVTKNNHFESSTVHSECTDQ
LSAENSFRPTNRNVSNHSSFVSYEEDDEHLTHLEVDSGSSTSYTSEDEINNVTGLGSPGT
KVWDGRSKRNQAISHIHHPLENFEGRTAKKTSKGHVNYRRLVKTPSGRKRSRSSSQKTPI
WQEVERSSFLSGDGQDILNSAKEHANVEDSSEESEIENLGRIHSGAAASSSASFFSIPES
HNSAVKSLQNSLAVNSFFKLRCEVLGANIVKSGSKQFAVYSVSVTDVNNNSWSIKRRFRH
FEELHRRLKEFPEYDLHLPPKHFLSTGLDVPVIHERCKLLDKYLKNLMQLPTISGSIEVW
DFLSVDSQTYLFSNSFSVIETLSVDLEDKPSGKAKRLPNFLGPVNDHLSLRREHLSTESK
ESAFQIKNNFVADGLRSNEKDSRTQNCTASLANLGNTARGRDGDSLEEASESHLDAATDP
TLPTEWVPPNLSVPILDLVDVILQVHDGGWIRRKAFWVAKQILQLGMGDAFDDWLIEKIQ
LLRKGSVIASGIRRVEQILWPDGIFISKHPKRRPPPSTNPSQNSPHGQSPTGVASPKISY
EQQQEAIRRAKFVYELMIDNAPATIVGLVGRKEYEQCAKDLYFFIQSSVCLKLLAFDLLE
LVVLSAFPELDYVFKQFEEEKHKFGEFKEN
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcagcagaggcaacacgtgaatgttcgtgacctcgccgaggaagccaagaag
cgagttgtggttcttatcatatgcgttgtcggattgtcctacctcatgtcgttgacaagc
tcctcagtatgggtcaacttgcctgctgctgcctccttaatcatcggccttcgttattta
tctttagattttgacatgcggagaaaagctgcagcatacaacagcaaaccatcctctaat
actgcttctcataagaaacctcttgaacatcctaaaattgttgaaaagtctgagtggaga
aggaaagtgaattctcctgttgttgaggatgcaatagatcactttacaagacatctagtt
tctgagtggatttcagatctctggtactctcgcttgacacctgataaagaaggtccagag
gaactggtgaatatcatgaatggtgctcttggggaaatttcagggcgcatgagaaatata
aatttaattgatcttctgacaagggatcttgttaatctaatttgcacccacttggagctt
tttcgagccaatcaagcaaagattgaaagacaaaattcaggaccactaacaattgagcaa
cgagatgtgcatctaagacgtatcctggctaacgaggacaaactgcaccctgctctattt
tcagctgaagctgagcacaaggttttgcagcatctaatggatggtcttattcctttgaca
ttcaagcctgaagatctgcagtgccttttctttcgctatataggcagggaacttcttgct
tctgcagtaatgcgacctgtcttcaaccttgctagtccaaaatttattaatgaaagaatt
gaagtcttagtccttaaaatgaccaaagctaataaagggttttccatgacacaaggggca
tctcaatccaaaccagaagagtcttcaaggattccatctgatcatttttctaggttctta
gatcctactgttactggtgttgaacttgtgcagttaaaaaccaatcagtctagaactgct
gccaatacatctgtaacagatcatgtgaatggaaatctttccaaagatccactgctttct
gttgatgctcgatcaactcgttcatggaactcattgcccttcaactcccaaactagtgaa
gaaacaggcattcaacaccagcgctcaggaggagaatggggtgacatgttagatctgatt
tctcgcagaaagactcaagcccttgctccagaacattttgagaacatgtgggcaaaaggg
agaaactacagaaagaaggaaggtgaaaatcgggtaattgagcaagtaccacagaattct
tcacctggaaagtcagttaaagtggatcattcaaaggcaatatccaagcccaaagaaaac
actgtaacaaagaataatcactttgagagtagtactgttcactctgaatgtactgatcaa
ctttctgctgagaactcattccgccctacaaatcggaacgtatcaaatcactcttcattt
gtttcatatgaagaagatgatgagcacctcacacatttggaggttgactcagggagcagc
acttcttatacttctgaagatgaaattaacaatgtaactggccttggttctccaggaact
aaagtttgggatggtagaagtaaaagaaatcaggctatttctcacattcatcatccactt
gaaaattttgaaggccgtactgcaaagaagaccagtaaaggacatgttaactatcgaagg
ttagtcaaaaccccttctggccgtaaaagatctagatcaagcagtcagaagacaccaatt
tggcaggaggttgagagatcaagcttcttgtctggtgacggacaggatatacttaattct
gcaaaagaacatgcgaatgttgaggactccagtgaggaatctgagattgaaaatttgggt
agaattcacagtggagcagctgcttcttcatctgcatccttcttttctattccagagagt
cataattcggctgttaaatccctgcaaaattcattggcggtgaattcattttttaagttg
agatgtgaggtattgggtgcaaatattgtgaagagtggctcaaaacaatttgctgtttat
tcagtatctgttacagatgtaaataacaatagttggtcaatcaaaagaaggtttcgtcac
tttgaggagctacatcggcgtctaaaagagtttccagagtatgatcttcatttgccaccg
aagcattttctatcaacaggtttagatgtacctgtcattcacgaacggtgtaaattgctt
gacaaatatttaaagaaccttatgcagcttccaacaatttctggctcaattgaagtttgg
gattttctcagtgttgactctcagacttatcttttttcgaattccttttccgtcattgaa
actttgtcagttgaccttgaggataagccatctggaaaggctaaaaggcttccaaatttt
cttgggcctgtaaacgatcacttatctttgaggagagaacatttgagcactgaaagcaag
gagtctgcatttcaaattaagaataattttgtggctgatgggttaagatcaaacgaaaaa
gattctaggacgcaaaactgtacagcttcccttgcgaacttggggaacactgcaagggga
agagatggtgatagtttggaagaggcatctgagtcgcatcttgatgctgctactgatcct
acccttcctacagagtgggtaccaccaaatttgagtgtccccatattagatttggtagac
gtcatcctacaggttcacgatggtggatggatcagacggaaggctttttgggtggccaaa
cagatactacaactaggaatgggtgatgccttcgatgattggttaatagagaaaatccag
cttctgcgtaagggatcagtgattgcttcagggatcaggcgggttgagcagatactttgg
cctgatggaatatttataagcaagcatccgaagcgacgaccaccaccatctacgaaccca
tcacagaattcaccccatggccaatcgcctacaggtgtagcttcacctaaaatcagttat
gagcaacagcaggaggcaattcggcgtgcaaaatttgtatatgagctaatgattgataat
gcaccagctaccattgtaggcctcgtaggccgtaaagagtatgaacaatgtgcaaaagat
ctctatttctttattcagtcatctgtatgtttgaagctcctggcttttgaccttcttgag
ctggtggttttgtcagcatttccagagctagattatgtgtttaagcagtttgaagaagaa
aagcataaatttggcgaatttaaggaaaattag
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