KEGG   Castanea sativa (European chestnut): 142636508
Entry
142636508         CDS       T11266                                 
Name
(RefSeq) uncharacterized protein LOC142636508
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142636508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csaa03019]
    142636508
   03041 Spliceosome [BR:csaa03041]
    142636508
Messenger RNA biogenesis [BR:csaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     142636508
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     142636508
Spliceosome [BR:csaa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    142636508
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_RdRP1_2 RRM_Nup35
Other DBs
NCBI-GeneID: 142636508
NCBI-ProteinID: XP_075666874
LinkDB
Position
5:10229245..10234627
AA seq 385 aa
MEDYAEQSHFEDDQFAYNGEGFREDFETLDHRHRHHQRREQFDSERGFEPEDNINSSGNE
IKHSSIVGHRDSASLGKLFVGGISWETSEDTFASYFGQYGEITDSVIMLDKHSGRPRGFG
FVTFSDPTVADKVLEDEHVIDGRMVEVKRTVPREDTDYKGVSKTKKIFVGGIPPSLTNEE
LKEYFSSYGSIVDHQIMVDHKTGRPRGFGFVTFESEDSVEEIFLEGKLHELGGKQVEIKK
AEPKRAGGDYRGNAAKSYGGFGGGAAGYGGYNSRGRGSGKMDRGYGGYGVYGAYGGYGGG
YGGSSASFYGGYSGYGYGFGYGGPMYGNAGYAAAGYGIPGGYAGAAGYSGSRGYGGADGG
GGYDNGMGYERTGSSVSGRYHPYRK
NT seq 1158 nt   +upstreamnt  +downstreamnt
atggaggattacgcagaacaatctcatttcgaagacgaccaattcgcttacaatggcgaa
ggatttcgcgaagattttgaaaccctagaccaccgccaccgccaccatcagcggcgagag
caattcgattcagagcgcggttttgaaccggaagataatataaatagctcaggcaatgag
ataaagcactcgtcgattgtgggtcaccgtgactctgcctctctaggaaagctttttgtt
ggaggcatttcgtgggagacctctgaagatacctttgctagttactttggtcagtatgga
gaaataacagattctgtaattatgttggataaacattcgggaagaccacgggggtttgga
tttgtaacattttctgacccaacagttgctgataaggttttggaggatgagcatgttata
gatggtagaatggttgaagtgaagaggacagtccctagggaggatacagactataagggg
gtatcaaaaacaaagaagatttttgttggtggaattccaccatctttgaccaatgaggag
ttgaaggaatacttctcttcttatggtagcattgttgatcaccaaattatggtggatcat
aaaactgggcggcctagaggctttggttttgtcacttttgagagtgaagacagtgttgaa
gaaatttttttggagggaaaattgcatgaacttggaggcaagcaggtggaaataaaaaag
gcagaacccaagagagctggcggtgattacaggggcaatgctgccaagtcatatggtggt
tttggcggtggtgcagctggatatggagggtataattccagaggtcggggtagtggaaaa
atggacaggggatatggtgggtatggtgtctatggtgcatatggcggttatggaggaggc
tatggtggaagttctgcaagtttctatggtggctatagtggatatggatatggatttggg
tatggtgggcccatgtatggaaatgctggatatgctgctgccggttatggcattcctggt
ggttatgctggtgctgctggatatagtggtagtagaggatatggaggagccgatggtggt
ggtggttatgacaatggtatgggatatgaaaggactggtagttctgtgtctggaagatac
catccttacagaaagtga

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