Castanea sativa (European chestnut): 142636668
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Entry
142636668 CDS
T11266
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
142636668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142636668
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
142636668
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
142636668
DNA repair and recombination proteins [BR:
csaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
142636668
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
TFIIF_alpha
COMM_HN
Motif
Other DBs
NCBI-GeneID:
142636668
NCBI-ProteinID:
XP_075667061
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All DBs
Position
5:complement(28653812..28662632)
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AA seq
444 aa
AA seq
DB search
MPELPEVEAARRAVEEHCLGKKIKKAIIANDTKVIDSVSASDFEAALLGKTLISAHRKGK
NLWLRLDSPPFPSFQFGMSGAIYIKGVAVTKYKRSAVNDTDEWPSKYSKFFIELDDGLEL
SFTDKRRFAKVRLLKDPAAVSPISELGPDALLEPMTVDEFTESLSKKKIAIKALLLDQSY
IAGIGNWIADEVLYQARIHPLQSSASMSKENSATLHKCIKEVIQYAVRVDADSSRFPLEW
IFHFRWDKKPGKVNGKILLLYVIILTEELILQVIEKAIEVGADSSQFPKNWIFHSREKKS
GAFVDGKKIDFINAGGRTTAYVPGLQKLSGNQAAKVAAEPRKKTSKRKSGGNDDTDELSN
EEEKIVETDQLKKGPKPRGRGKKPPMKRKSDDSDDDDAGDDNSDDDEVQKKTTKKITTKQ
AKAEKASKKKVQSSQNRKKPNKAK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctgccggaagtggaggcggcgaggcgggcggtggaggagcactgcctcggc
aagaagataaagaaggccataattgccaacgacaccaaggtcatcgactccgtctccgcc
tccgacttcgaggccgctctcttgggcaaaaccctaatttcggcccaccgcaagggcaag
aatctctggctccgcctcgattcacctcccttcccttccttccaattcgggatgtcaggt
gccatatatattaagggtgttgcagttacaaaatataagaggtctgctgtaaatgacacc
gatgaatggccttccaagtattcaaagttttttatagaactagatgatggtttggagctg
tctttcacagacaagaggcgctttgctaaagtccgcttactcaaagatccagctgcagtg
tcccccatatctgagcttggccctgatgcattattggagcctatgactgttgatgaattt
actgaatcgttgagcaagaagaaaatcgcaattaaggctttattacttgaccagagttat
attgccggcataggcaattggattgcagatgaagtgctttaccaagcaagaattcatcca
ctgcaaagctctgccagcatgtccaaagaaaacagtgcaactttgcacaagtgcataaaa
gaggttattcaatatgcggttagagttgatgctgacagcagtcgctttcctcttgagtgg
atttttcattttcgatgggacaaaaagcctggaaaagttaatggtaagatacttctatta
tatgtgatcattttgactgaagaattgattttacaggtcattgagaaagcaattgaagtt
ggggcggatagtagtcagtttcctaaaaactggatatttcattcccgtgaaaagaagtct
ggggcttttgttgatgggaagaaaattgattttatcaatgctggtggcaggacaacagcc
tatgtaccagggttgcaaaagctaagtggaaaccaagctgcaaaagtagcagctgaacca
agaaagaaaacttcaaagaggaaaagtggtgggaatgatgacactgatgaactatcaaat
gaggaagagaaaattgttgaaactgatcaactgaagaaaggaccgaagcctagaggtcga
ggaaaaaagcctccaatgaaaagaaaatctgatgacagtgatgatgacgatgctggtgat
gataatagtgatgatgatgaagttcaaaagaagacaacgaaaaaaatcactactaaacag
gctaaggcagagaaggcatccaagaaaaaggtgcaaagcagtcaaaatcgtaagaagcca
aacaaagcaaagtag
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