Castanea sativa (European chestnut): 142637130
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Entry
142637130 CDS
T11266
Name
(RefSeq) beta-galactosidase 17-like isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00052
Galactose metabolism
csaa00511
Other glycan degradation
csaa00531
Glycosaminoglycan degradation
csaa00600
Sphingolipid metabolism
csaa00604
Glycosphingolipid biosynthesis - ganglio series
csaa01100
Metabolic pathways
csaa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
142637130
09103 Lipid metabolism
00600 Sphingolipid metabolism
142637130
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
142637130
00604 Glycosphingolipid biosynthesis - ganglio series
142637130
00511 Other glycan degradation
142637130
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
142637130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142637130
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
142637130
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142637130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
BetaGal_ABD_1
Glyco_hydro_42
BetaGal_ABD2
Phage_TAC_5
Motif
Other DBs
NCBI-GeneID:
142637130
NCBI-ProteinID:
XP_075667520
LinkDB
All DBs
Position
5:10463185..10475622
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AA seq
699 aa
AA seq
DB search
MARNRNTRTKTTFFFTLFTITVFCYFTPVFGFGSSPPLPSHSHHDHSHHNQVTARKFEIA
NDMFWKDGQPFQIIGGDLHYFRVLPEYWEDRLLRAKALGLNTIQTYVPWNLHEPEPGKLV
FEGIADIVSFLKLCHKLGFLVMLRAGPYICAEWDLGGFPAWLLAIEPALRLRTSDPAFLH
LVERWWEILLPKVVPLLYENGGPIIMVQIENEFGSNGNDKAYLHHLATLARGHLGDDTIL
YTINGGTREKLDRGTIREDNVFSAVDFPTASDPWPRFELQKEFNAPGKSPPLSAEFYTGW
LTHWGEKIAETDADFTASVLEKILARNGSAVLYMVHGGTNFGFYNGANREDESVYMADIT
SYDYDAPIRESGDVDNAKFKALRRVIEAYSAVPLPSVPFNNEKTGYGRIHLQKKEFLLDI
VDRISSTDVVESENPMSMESVGQMFGFLLYVSEYAAKDDGNILYIPEVHDRAQVFISCSS
EDNGGRPIYVGTIERWSNLTLGLPKTECVSNISLYLLVENMGRINHGNYIFDRKGILYSV
YLDERILNQWKMIPIPLNNLNEVPKTNPVIQVAYSEFTDVPAHRGAKENVTKEPAFYVGR
FSIDKVNLVNDTFISFRGWGRGIAFVNGFNIGRYWPLKGPQCNLYVPAPVLRHGENVVVL
LELESPNAELVIDSVDQPDFTCTSSTSNLHRLEQTKYTM
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaatcgaaacacaagaaccaaaactaccttcttcttcaccctcttcactatc
acagtcttctgttacttcacccctgtctttggctttggttcttcccctccacttccctct
cactcccaccatgatcactctcaccacaatcaagttactgctcgaaagttcgagattgcc
aatgacatgttttggaaagacggacagccattccagattattggtggtgacttgcattat
ttccgggttctcccagagtactgggaagatagattattgagagcaaaggctttgggtttg
aatactatccaaacttatgttccttggaatttacatgaaccagaacctggaaagctagtt
tttgaggggattgcagatatagtatcatttctcaagctctgccacaaacttggctttctt
gtcatgcttcgagctgggccttatatctgtgcagaatgggatttggggggtttccctgcc
tggttacttgccatagagccagctctcagactaagaacatcagatcctgcttttctccac
ttagtggaaagatggtgggaaatcctacttccaaaggtagttcctcttctctatgaaaat
ggaggccccattataatggttcagattgaaaatgaatttggttcaaatggaaatgacaaa
gcttatcttcatcacctcgccaccttggcccggggtcatcttggagatgatacaattttg
tatactataaatggagggacaagggagaaacttgatagaggaacaattcgtgaagataat
gtcttttcagcggttgacttccctactgcgtctgatccatggccaagatttgagctacaa
aaggagttcaatgcccctggaaagtcaccaccactttcagcggagttttacacaggttgg
cttacacattggggagagaagattgcagagactgatgctgattttacagcatctgtcctg
gaaaagattctggcaagaaatggttctgcagtgctatatatggtacatggtggtacaaat
tttggattctacaatggggcgaatagggaagatgagtctgtttacatggctgatatcact
tcctatgattatgatgcaccaattagggaatctggtgatgtagacaatgcaaaattcaaa
gcacttcgaagggttatagaggcatacagtgcagtgcctcttccttcagttcctttcaat
aatgaaaagacaggatatggacgtattcacttacagaaaaaagaatttttgttggatata
gttgataggataagttcaactgatgtggttgaatctgaaaacccaatgtcaatggagtct
gtgggacagatgtttgggtttttgttatatgtttctgaatatgctgcaaaggacgatggg
aacattctgtacataccagaggtgcatgacagagctcaagtttttatatcatgctcttct
gaagataatggtggaagacctatatatgttggcacaattgaaagatggtcaaatctaaca
cttggccttcctaaaactgaatgtgtctccaacatcagcttatatctactggttgaaaat
atgggtcgcataaaccatggcaactacatttttgacaggaagggtattttgtattctgtt
tatctggatgagagaattctaaaccaatggaaaatgatcccaattcctttgaacaacctg
aatgaggtcccaaaaaccaatcccgtcattcaggttgcatattccgagttcacagatgta
ccagctcacagaggagccaaagagaatgttacaaaagaaccagcattctatgtcggccgt
ttctctattgacaaagtaaaccttgttaatgacacattcatatcattcagaggttggggt
agagggatagcatttgtcaatggatttaatataggaagatattggccgttgaagggacca
caatgcaacctttatgtccctgctccagttcttcggcacggggaaaatgttgtggttcta
cttgagttagaatctccaaatgctgagcttgtgattgactcagttgatcagccagacttc
acatgcacatcaagtacatcgaacttgcatcggctggaacaaaccaagtacaccatgtaa
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