Castanea sativa (European chestnut): 142637310
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Entry
142637310 CDS
T11266
Name
(RefSeq) putative U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csaa03009
]
142637310
Ribosome biogenesis [BR:
csaa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
142637310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
142637310
NCBI-ProteinID:
XP_075667700
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Position
5:complement(52270485..52278381)
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AA seq
539 aa
AA seq
DB search
MSVVKATKEEKKKKETEEQEEISEDLDLKVKKYLRGGAANFDDLKDKKLKGQLSHREFLY
GASAKAAAKYEKWLMPSEGGYLEADGPVEKTWRIKQEDIRREVDISSSRNQHDVILPEFS
PYTLDFTSNGQYMAAAGRKGHLAIVDMKNMIPRREIQVGETVRDVVFLQDQSFFAAAQKK
YTYIYGQEGIEAHCLKDQGAVLKLQFLKNHFLLASINKFGQLHYEDVSMGAMVGNIRTGL
GRTDVMQVNPYNAVVALGHSGGTVTMWKPTSSAPLVKMLCHHGPVSALAFHPNGHLMATA
GKEKKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLACGIGSFVQVLSDFSGTQNYSRYMN
HSMVKGYKISNLLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETRKQRGEKE
VHLLLDKLPPETIMLDPTKIGTVKTARKKEKLTKKEVEAEMDATVEAVKDSINMKKKTKG
RSKPSKKLKKRQEIIAKAKRPFLEQQMQDGQLSIKKQKISEEVELPKSLQRFARKKAAT
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggtgaaggcgaccaaggaggagaagaagaagaaagagacggaggagcaggag
gagatatcagaggacttagatttgaaagtaaagaaatacctcagaggcggcgccgccaat
ttcgatgatttgaaagataaaaaactcaagggccagctttcccaccgagaatttttgtat
ggagcttctgctaaagccgctgctaagtatgaaaagtggcttatgccaagtgagggaggg
tatttggaggcggacggtccagtagagaagacatggagaatcaaacaggaagatattagg
cgcgaagtcgatatctccagttccaggaatcaacatgatgttattttaccagaatttagt
ccttacactcttgattttacctcaaatggtcaatatatggctgctgctggacggaagggt
catctggccatcgtagacatgaagaatatgatcccaaggagagaaattcaggttggagaa
acagtgcgtgatgtggtgttcttgcaagatcagtccttctttgctgctgcgcagaaaaag
tatacatatatttatggccaagagggcatagaagctcactgcctaaaggatcaaggtgca
gtgttaaaacttcagtttcttaaaaatcactttctcttggcatccataaacaaattcggg
cagctccattatgaagatgtatcgatgggtgctatggtaggtaatatccggactggttta
ggtcgtactgatgtgatgcaggtgaatccctacaatgcggttgttgctttgggtcattct
ggtggaacagttaccatgtggaagcctaccagctctgctcctctagtcaagatgctgtgt
catcatgggcccgtctctgccttggcattccaccctaatggccatctcatggccacagct
gggaaggagaagaaaattaagctttgggacttgaggaaatttgaggttctccaaacttta
ccaggtcatgcaaagactttagatttcagtcagaagggtttgcttgcatgtggaattggt
tcttttgtacaggttctttctgatttttcaggaactcagaattatagcagatatatgaat
cattcaatggtgaaaggttacaagataagtaacttgttgtttagaccatatgaagatgtt
ctaggtatagggcactccatgggttggtctagtattcttattccaggatctggggaaccc
aactttgattcttgggtggctaatccatttgaaacacgaaaacagaggggagagaaggaa
gtgcaccttcttcttgacaagcttccacccgagacaattatgctagaccctacaaagatc
ggtacagtgaagacagcaaggaagaaagagaagttaacaaagaaggaagtagaggccgaa
atggacgctaccgtagaagctgtgaaggacagcatcaacatgaagaagaaaacaaagggg
aggagtaagcctagtaagaagttgaaaaagagacaggagattattgctaaagctaaaagg
cctttcttggaacaacagatgcaggatggacaattatccataaagaagcagaaaatcagc
gaggaagttgagcttccaaaatctttgcaacgttttgctcgtaagaaagctgcaacatga
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