KEGG   Castanea sativa (European chestnut): 142637378
Entry
142637378         CDS       T11266                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    142637378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csaa04121]
    142637378
   03036 Chromosome and associated proteins [BR:csaa03036]
    142637378
Enzymes [BR:csaa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     142637378
Ubiquitin system [BR:csaa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    142637378
Chromosome and associated proteins [BR:csaa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     142637378
    Noncanonical PRC1 (PRC1.1)
     142637378
    Noncanonical PRC1 (PRC1.3/1.5)
     142637378
    Noncanonical PRC1 (PRC1.6)
     142637378
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-UDP zf-RING_4 zf-rbx1 zf-RING_6 zf-Nse zf-C3HC4_5 zf-RING_10 ZNF512_C2HC zf-RING_11
Other DBs
NCBI-GeneID: 142637378
NCBI-ProteinID: XP_075667774
LinkDB
Position
5:40866123..40873402
AA seq 463 aa
MPAQKRGVEEEEEEEEEEEEELVEVDDPVEHDHSNHEQHQEEPQESDRSHSSSNGDNKDE
FVVVKLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
RRSLRDDPKYDALISALYPDIDKYEEEELAFHEEERARNKQIQASIAQTFRRQAEALGRK
RSTAKATAAAFVRRSRGYRNAHLRGRRNYRNAAESQGSDDNEDANVNDGGKDSSSADEHT
EVRPKRSKRWGGVRFSLPSPAAASTDGGGDENDSEVNRESIGVSAGLVGSSERLAWGKGG
MRSHTRYGSMNGGNGKNARNSRLSKLAEYLRNLEENDNELTINLMLVSFDEQSIPSLERP
YLCCKPTLSVRQLRKYVAVQTASQDDEVVLYLVNELDSKINPSTSSSEILSKSRVINPGK
DKLRILGEQETLAGLTTGNFVHGYLLLAYERKQWHSDFLMGLS
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgccggcacagaagcgaggtgtggaagaggaggaggaggaggaggaggaagaggaggag
gagttggtagaggtggatgatccagtggaacacgaccacagtaaccatgaacaacaccaa
gaggaaccacaagaatctgatagaagccattcgtccagtaatggagacaacaaagacgaa
ttcgttgtggtgaaactgtcagatatccgcaaggaagtacaatgcccaatctgtctaggg
atcattcggaaaactcgaacagtaatggaatgcctgcatcgcttctgcagggaatgcatt
gacaaatcgatgcggcttgggaacaatgaatgccctgcctgccgaacacattgtgctagt
cgtcgctccttgagagatgatccaaagtatgatgccttaatttcagctttgtatccagat
attgacaagtatgaggaagaggaattggcttttcatgaggaggaaagggctcgcaataag
cagatacaagcttccattgcccaaacttttcgacggcaagcagaagctctgggtaggaag
cggtcaacagctaaagccacagcagctgcatttgttaggagatctagaggctatcgaaat
gctcatttgagaggaaggagaaactatcgaaatgctgctgaaagtcaaggatctgatgac
aatgaggatgcaaatgttaatgatggaggcaaagattcatcttctgctgatgagcacaca
gaagtcagacccaaaagaagcaagagatggggaggagttcgattttctctgccttctcca
gcagctgctagtacagatggaggtggggatgaaaatgattccgaagtaaacagagaatcg
ataggtgtgtctgctggacttgttggcagttcagaaaggcttgcgtgggggaaaggtgga
atgcggagtcacacacgatatggaagtatgaatggtggaaatggtaagaatgcccggaac
agccgcctctcaaaattggccgagtatctgcggaacttagaggaaaatgataatgagtta
acgatcaacctcatgcttgtttctttcgatgaacaaagtataccgagtttggagaggccc
tacctttgctgcaagcctaccctgtcagttagacaactgcgcaagtatgttgctgtccaa
actgcatctcaagatgatgaagttgtattatatttggtgaatgaattggattccaaaatc
aacccttcaacctcttcgagtgaaatactgtccaagtctcgtgtaattaatccaggcaaa
gataagttgagaattttaggggagcaggaaaccttggctggacttacaacaggcaatttt
gtacatggctatctgcttctggcatacgagagaaagcagtggcactcagattttctgatg
ggtttgtcatga

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