Castanea sativa (European chestnut): 142637393
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Entry
142637393 CDS
T11266
Name
(RefSeq) eukaryotic initiation factor 4A-2-like
KO
K03257
translation initiation factor 4A
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142637393
03012 Translation factors [BR:
csaa03012
]
142637393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142637393
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
142637393
mRNA cycle factors
Stress granule specific factors
142637393
Translation factors [BR:
csaa03012
]
Eukaryotic type
Initiation factors
eIF-4
142637393
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142637393
Exosomal proteins of bladder cancer cells
142637393
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
Ubiquitin_TPR1
Motif
Other DBs
NCBI-GeneID:
142637393
NCBI-ProteinID:
XP_075667786
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Position
5:complement(7940500..7946169)
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AA seq
414 aa
AA seq
DB search
MAGAAPEGSQFDARQFDAKMNELLSTDGQEEFFTSYDEVYESFDSMKLHENLLRGIYAYG
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELVQCQALVLAPTRE
LAQQIEKVMRALGDYLNVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR
PDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPV
RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ
PENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVQVEELPSNIADLL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgcagctccagaaggttcacaatttgatgctcgccagtttgatgctaaaatg
aatgagttactctcaactgatgggcaagaagagttcttcacctcatatgatgaggtttat
gaaagttttgattcaatgaaattgcatgaaaaccttctgagaggaatctatgcttacggt
tttgagaagccttctgcaattcagcaaagggggattgttcctttctgcaaaggtcttgat
gttattcaacaggctcagtctggaactgggaaaacagcaactttctgctctgggattttg
caacaacttgattatgagcttgtccagtgccaggctttggttttggcacccactagggaa
cttgcacaacagattgagaaggttatgcgggcacttggtgattatcttaatgtcaaggtt
catgcttgcgttggtggcacaagtgttcgtgaggatcaacgcatccttcaggcaggtgtt
catgttgttgtaggcacccctggtcgtgtatttgacatgttgcgaaggcagtcacttcga
cctgattacattaagatgtttgtactggatgaggctgatgaaatgctttctcgtggtttc
aaggaccagatctatgatattttccagctgcttcccgccaaggttcaggttggggtgttc
tctgctacaatgcctcctgaagcccttgagatcactaggaagtttatgaacaagcctgtg
agaatcttggtgaagcgagatgaactcacccttgagggtatcaagcagttttatgtgaat
gttgagaaggaagagtggaagcttgagacactatgtgatctctacgaaaccctggccatc
acccaaagtgtcatctttgtgaacacacggcgcaaggttgactggctcactgacaagatg
cgtggccgtgaccatacagtctcagccacccatggtgacatggaccagaatactcgtgat
ataattatgcgtgaattccgctctggatcttcccgtgttctcatcaccactgacctcttg
gctcgtggtattgatgtgcagcaagtctccttggtcataaactttgatctgccgactcaa
ccagaaaattaccttcaccgtattggacgaagtggacggtttgggagaaagggtgttgcc
attaattttgttacaaaggacgatgagcgaatgctgtttgacattcagaagttctacaat
gtgcaagttgaggagctgccatcaaatattgcagatctcctgtga
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