Castanea sativa (European chestnut): 142637883
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Entry
142637883 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142637883
KO
K03504
DNA polymerase delta subunit 3
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03030
DNA replication
csaa03410
Base excision repair
csaa03420
Nucleotide excision repair
csaa03430
Mismatch repair
csaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142637883
03410 Base excision repair
142637883
03420 Nucleotide excision repair
142637883
03430 Mismatch repair
142637883
03440 Homologous recombination
142637883
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csaa01009
]
142637883
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csaa03032
]
142637883
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142637883
Protein phosphatases and associated proteins [BR:
csaa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142637883
DNA replication proteins [BR:
csaa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
142637883
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
142637883
MMR (mismatch excision repair)
DNA polymerase delta complex
142637883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
142637883
NCBI-ProteinID:
XP_075667959
LinkDB
All DBs
Position
6:complement(25429452..25437287)
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AA seq
542 aa
AA seq
DB search
MAGIETPLGLLDEIQSLVSDTLQVVSYKWLSRNYLLSSNAAKRLLWEFVEKHGGSGTGGG
SGLELEVVYTLSGWLKNDSSNYHITLVSSPKLSEAKQEFDGNCSVQVYSVQASVPKDPAA
LWNPEFVQAEELFKQSFEVDNCFRDNRFCGISNSFVKCNMEGTPVSIVNPMPKTAGGQGQ
SKSNSMNQNNVVPQPQQNKVQESSPKVVLQTPNVVQDVKSETNGTGLHSQSTKPPSDKEK
VPPMTAGKKKVQNGKSSSGTGGSLANIWGRASAKSKPVVPVENNNVLPNPPASAEAQICA
REAVEGGSSDDDGQDVNFKRASNGESGRKRRVVFDFSDEDEYEDAVSLASPDIPKVQSSQ
DQKQSTKVLVSEKSNLNSDKQKEDDLGVKEEIVTDKESNQPLREDSSVISKGTNTGTSCR
EKVQNCIPESDVNKKDNLKIAAPNSPKRKKVLKTRINERGREVTEVIWEGEETDAKKADS
SMTKETNNSALSNTVSSPPAAKKSPATGTTAPSNPTGKAGNKKAGSLKDPKQGNILSFFK
RV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaatcgaaactcccctagggttgctagacgagatccaatcccttgtctccgac
accctccaagtggtttcttacaagtggctcagtcgcaattatttgctctcgtcaaatgct
gctaagaggttgctttgggaattcgttgaaaaacacggaggaagcggaaccggtggtggg
tcgggattggaactggaagtggtatatacattgtctggatggttgaagaacgattcctct
aattaccatataacccttgtttcctctcctaaactttcagaagctaaacaagagtttgat
ggcaattgctcagttcaggtttatagtgtgcaagcttctgttccaaaggatccagctgca
ctttggaatcccgagtttgtacaagctgaagagctctttaagcagtcatttgaggttgac
aattgcttcagagataacaggttctgtgggatttccaattcctttgtcaagtgcaatatg
gagggaacacccgttagcattgtaaatccaatgcccaaaactgctggaggccaagggcaa
tccaaaagcaatagtatgaatcaaaataatgtggttccacaacctcagcaaaataaagtg
caggaatctagcccaaaagttgttctgcagactcccaatgtggtacaagatgtcaaaagt
gaaaccaatggcacagggcttcacagtcagagtaccaagcctccttcagataaagaaaaa
gtccctcccatgactgctggaaaaaagaaagtccagaatggtaaaagctcttctggcact
gggggttcattggccaatatttggggtcgtgcatctgcaaagtcaaagccagtagtccct
gtggaaaataataatgtccttccaaatccacctgccagtgcggaggctcaaatatgtgct
cgtgaagctgtagagggtggcagcagcgatgatgatggtcaagatgtcaattttaagaga
gcctccaatggtgagagtggtagaaaaaggagggttgtttttgatttttcagatgaagat
gaatatgaagatgcagtcagtttagcatcaccagatattccgaaagttcaatcatctcaa
gatcagaaacaaagtacaaaagttttggtttcagagaaatccaatttgaactcggacaag
caaaaagaagatgaccttggggttaaggaagagatagttactgacaaagaatctaaccaa
cctctgagagaggattcttcagttatcagtaagggcacaaacactggaacttcctgtaga
gagaaagttcaaaactgtattcctgaaagtgatgtaaataagaaggataatctgaaaatt
gctgctccaaattcccctaaaagaaaaaaggtgttgaagacacggatcaatgagcgggga
agagaagtaactgaggtaatctgggagggtgaagagacagatgcaaagaaagccgacagt
agtatgacaaaggaaaccaacaactctgcattgagcaatacagttagcagtcctcctgca
gctaagaagtcaccagcaacaggaaccacagctccatccaatccaacaggtaaagcagga
aataagaaagcagggagcttgaaagatcctaagcaaggcaacattctttcattcttcaag
agggtttaa
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