KEGG   Castanea sativa (European chestnut): 142638364
Entry
142638364         CDS       T11266                                 
Name
(RefSeq) proliferating cell nuclear antigen-like
  KO
K04802  proliferating cell nuclear antigen
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03030  DNA replication
csaa03410  Base excision repair
csaa03420  Nucleotide excision repair
csaa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    142638364
   03410 Base excision repair
    142638364
   03420 Nucleotide excision repair
    142638364
   03430 Mismatch repair
    142638364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csaa03032]
    142638364
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142638364
DNA replication proteins [BR:csaa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    142638364
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     142638364
   MMR (mismatch excision repair)
    Other MMR factors
     142638364
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    142638364
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1 Rad9 Ribosomal_L14
Other DBs
NCBI-GeneID: 142638364
NCBI-ProteinID: XP_075668501
LinkDB
Position
6:complement(42044060..42046859)
AA seq 322 aa
MLELRLVQGSLLKKVLESVKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY
RCDRNLSMGMNLNNMAKMLKCAGNDDIVTIKADDGGDTVTFMFESPTQDKIADFEMKLMD
IDSEHLGIPEAEFQAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI
VCRQNTTVDKPEDATVIEMQEPVSLTFALRYMNSFTKATPLSNQVTISLSSELPVVVEYK
VAEMGYIRFYLAPKLEEDDIENQAEARPEVNKKPKEEPIVDAKPISEIKPKLEVKAEDEN
KPQIESTTAVGSKEEIDLMDDE
NT seq 969 nt   +upstreamnt  +downstreamnt
atgctagagctaaggctagtccaagggagtctattgaagaaggttctggaatcggtcaag
gaccttgtcaatgacgctaacttcgactgctccgccaccgggttctcgctccaggccatg
gattccagccacgtggcactcgtggctctcctcctcagatctgagggcttcgagcactac
cgctgtgaccgtaacttgtccatggggatgaacctcaacaacatggccaagatgctcaag
tgcgccggaaatgacgatattgttaccattaaggccgatgatggcggcgacaccgtcact
ttcatgttcgaaagccctactcaagacaagattgctgactttgagatgaagctgatggac
atagacagtgagcatcttggaatccctgaagcagagttccaagccattgttaggatgcca
tcagctgaatttgcaaggatttgcaaggaccttagctccattggtgatactgttgtgata
tctgtgacaaaggaaggtgtgaagttctccaccagaggtgatattgggactgccaatatt
gtttgcagacagaatactacagtggacaagccagaagatgctaccgtaatagaaatgcag
gagccagtctcattgacctttgcactaaggtatatgaactcattcacaaaggcaacccct
ttgtcaaaccaagtcacaatcagcctgtcttcagaactgcctgtggtagttgagtacaaa
gtagcagagatgggttacataaggttctacttggctccaaagttagaagaagatgacatt
gaaaatcaagcggaagccaggcctgaagtgaacaagaagcctaaagaagagcctattgtg
gacgccaagcctatatcggagattaagcctaaattggaggtcaaggctgaagatgagaat
aagcctcaaattgaaagcaccactgcagtgggatctaaggaggaaattgatcttatggat
gatgagtag

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