Castanea sativa (European chestnut): 142638593
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Entry
142638593 CDS
T11266
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142638593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142638593
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
142638593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
142638593
NCBI-ProteinID:
XP_075668744
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All DBs
Position
6:complement(31184221..31191552)
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AA seq
329 aa
AA seq
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MAAKLPESPFGSEPTSSTNVRASPSTSGTNNTHGGVHPSRQYYLEQLIVALHNDHTREEA
LHLLYKSCGAHEDLALLLWHSFGTIYILLKEIIAVYRLISAPELTESVLMRVCNALALLK
CVATHPDTRMLFIKARIPLYLYPLLNNTNKESSHERLRLISLGVIGALVKAGDAEVITVL
IENQIIDHCIHCMEVGSVLSKTVATFVVHKILLQDEGLKYCCTFAHRFYAVGHTLAKMVE
NLPEEPSEQQLQLLKHIICCYQRLSQSPRACDGLKFCLPTRLRDATAINLLRVDQTTIRL
LEQLVYNVSIGHQSTTKPFGKSLMHLVKG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaaacttccagaatccccgtttgggtcagagccgacatcatcaacgaacgta
agagcgagtccaagcacatcaggaaccaacaacactcatggtggagttcacccctcaaga
cagtactacttggaacagttgattgttgctcttcacaatgatcatacccgagaggaagct
cttcacctcctatacaagtcttgtggagctcatgaagatttagctctattgttatggcat
tcctttggaacgatatacatactcttaaaggaaataattgcagtataccgcttaatatca
gccccagagcttacagagagtgtattaatgcgcgtatgcaatgctcttgctctacttaag
tgtgtagctactcacccagatacaaggatgctgtttatcaaggctagaataccactatat
ctataccctcttcttaacaatacaaacaaggaatcgtctcatgaacgtttacggcttatc
agcttaggtgttattggtgccttagtgaaggctggtgatgcagaagttattactgtcctc
attgaaaatcaaataatcgatcattgcatacactgcatggaggtgggcagtgtattgtca
aaaacagttgccacatttgttgttcataaaattctactgcaagatgaggggctgaagtat
tgctgtacttttgcacaccgattttatgcagtaggccacactttggcaaagatggtagag
aatcttcctgaggaaccctcagaacaacagctacagctgctaaaacatattatctgttgc
taccaaaggctctcacaaagtccaagggcgtgtgatggtttaaaattctgccttcccaca
aggttaagagatgctacagccataaacctcctacgtgttgaccaaacaaccataaggttg
ctggaacaattagtttacaatgtctcgatcggacaccaatctacaacaaaaccgtttgga
aagtcacttatgcacttggttaaaggctaa
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