Castanea sativa (European chestnut): 142638629
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Entry
142638629 CDS
T11266
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142638629
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
142638629
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
RtcR
Chromo_2
Motif
Other DBs
NCBI-GeneID:
142638629
NCBI-ProteinID:
XP_075668791
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Position
6:55017422..55024746
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AA seq
613 aa
AA seq
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MGVVGLWDLLKPYARPEGPDFLVNKRVAVDLSFWIVQHETAIKARVRNPHLRLTFFRTIN
LLSKFGAFPVFVTDGTPSPLKSRARIARFFHASGIDLSDLPVAEEGVSVERNTAFSKCVQ
ECVELLELFGMPVVKAKGEAEALCAQLDSEGYVDACVTADNDAFLFGAKCVIKFVRPNSK
EPFECYHMSDIEAGLGLKRKHLIAISLLVGNDHDLNGVQGIGLDTALRFVQAFSEDEILN
RLHEIGSGDSPIFQGAIKSLDDCVPVSSESSLKIKCSHCSLCGHPGSKRAHFKFSCEYCS
TSNGEGCMKKPEGFKCDCSSCDMDRREKEQKKQENWRIKVCNKIAMESNFPNDEIIKMYL
CSNHGDFTEKVGPCISWGSPNTEMLVDFLAFHQHWEPSYIRRMMLPMLSTVFLREMAKNP
VKTLLYGQYEFDSIQRLKIRYGHQFYVVKWKKAVPALGSVMNTILSEESDMQQDVVDVDE
SLDLGDESEGPRIHVEEGSSYLLTDENMDIVQAAFPEEVDRFLHEKELKESKRKKSSSLR
SEGTNEKSELKSSRGVQLSITEFYRSTKVQIQLKPGEDLPRVSDSQGDGTSKEKRKVSNP
NLSKSVRRRLLFK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggggttgtaggtctctgggacttgcttaaaccctatgcccgacccgaaggcccagat
ttcctggttaacaaacgggtcgccgtggacctctccttctggatcgtccagcacgaaacc
gctatcaaagcccgtgtcagaaacccacacctcaggcttactttcttccgtaccatcaat
cttttatccaagtttggagcatttccggtctttgtcactgatggaactccatcgccactg
aaatcgcgggcaaggattgcaagattctttcatgcttctggcattgatttgtcagatttg
cctgtggctgaagagggtgtttcagttgagaggaatacagcattttcaaagtgtgttcaa
gagtgtgtggaactgcttgagctatttggtatgcctgtagtaaaagcaaaaggagaggct
gaagcactgtgtgcacagttggacagtgagggttacgtagatgcatgtgtcacagctgat
aatgatgcattcctctttggggctaaatgtgtgataaaatttgttcggcccaattccaaa
gaaccatttgaatgctaccatatgtcagatattgaagccggtcttgggttaaagaggaaa
cacttgatagccatctctcttttggttggaaatgaccatgatttaaatggggtgcaaggc
attgggcttgatactgctctacgttttgtacaagctttttctgaagatgagatattgaat
aggttacatgaaataggcagtggagatagtccaatatttcaaggtgctataaaatcttta
gatgattgtgtacctgtctcgagtgagagctcactgaagataaaatgttctcattgttcc
ctctgtggacatcctggcagcaagagagctcattttaagttttcttgtgaatactgcagt
actagtaatggtgagggctgcatgaaaaaaccggaggggtttaaatgtgattgctcctcc
tgtgatatggatcggagagaaaaggaacagaagaagcaagaaaattggagaataaaagtt
tgcaacaagatagctatggagtctaatttccccaatgatgagattattaaaatgtatttg
tgcagcaaccatggtgattttactgaaaaagttggtccttgcatatcatggggaagccca
aatactgaaatgcttgttgatttcttagcttttcatcagcattgggagccatcctacatt
cggcggatgatgcttcctatgttgtctaccgttttcttacgagaaatggcaaaaaatcct
gtaaaaactttgttatatgggcagtatgagtttgactctatacagcgtctgaagataaga
tatgggcatcaattctatgtggtcaagtggaaaaaagctgtgcccgccctgggcagtgtt
atgaatacaatcctttctgaggagtctgatatgcaacaagatgttgtggatgttgatgaa
tctcttgatttaggggatgagtctgagggccccaggattcatgttgaggagggtagcagc
taccttttgacagatgaaaatatggacattgttcaggctgcttttccagaagaagttgac
agatttttgcatgaaaaggaattaaaagaatccaaacgaaaaaagagttcaagcttaaga
tccgaagggacaaatgaaaagtcagaactaaaaagttcacgaggtgtccaactaagtatt
actgaattctaccgttcaaccaaagttcaaattcagttaaaaccaggagaagatctaccg
agggtttctgatagtcagggtgatgggacctcaaaagagaagaggaaagtgtcaaatcca
aatctttccaagtctgttaggcgtcgccttttgtttaagtag
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