Castanea sativa (European chestnut): 142638647
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Entry
142638647 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142638647
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csaa03032
]
142638647
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142638647
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
142638647
DNA replication proteins [BR:
csaa03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
142638647
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
142638647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Pif1_2B_dom
DEAD
AAA_22
PhoH
UvrD-helicase
AAA_11
AAA_16
ResIII
ABC_tran
ATPase
AAA_5
nSTAND3
AAA_7
NACHT
Mg_chelatase
TsaE
NPHP3_N
Herpes_Helicase
SLFN-g3_helicase
Sigma54_activat
ATPase_2
ATP-synt_ab
P-loop_TraG
TrwB_AAD_bind
NTPase_1
RsgA_GTPase
NB-ARC
AAA
MobB
Motif
Other DBs
NCBI-GeneID:
142638647
NCBI-ProteinID:
XP_075668808
LinkDB
All DBs
Position
6:62193921..62196090
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AA seq
526 aa
AA seq
DB search
MGFITTAMAAYRYFSTSSIGKSTKFAQNRFRSKTKTKNSEPRKPRTRIKWTDQQKQIISA
ISEGNSVFIMGSAGTGKTLLVNHIIKLLKKCHPRSGVFVTAPTGVAACAIGGQTLHSFAG
IGPGVGDRHTLLDRVLSDKKAYNRWKKVKALVVDEISMVGAELFENLEFIAREIRGEDEV
WGGIQLVVSGDFFQLPPVLCKRNASGKEFAFEADCWNASFDFQFELTEVFRQSDLRFLKM
LQGIRRGECEPQDIEFLEQSCSVTESESDPSVVQLYPLNKDVETVNQMRMEDLAEEGTIY
LAVDSGNNPWKNQLKQGIAPDEIFLCEGARVMLIKNLSTWRGLVNGATGTIIGFQEPENM
DVTDMCYDNLLPIVKFDSGLTMVITPAKWVVMEGDSVVAERKQIPLRLSWALSIHKCQGM
TLDKLQTNLSGAFGYGMVYVALSRVRSLEGLKLQGFRPSKIKAHPKVLQFYKVFVSERDT
EVKHDGANKISDQSSEVAHVTDTRSNGATKYHFSLSEFLSSRQKRK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggtttatcaccactgcaatggctgcatacagatactttagcaccagtagtattggg
aaaagcacaaaatttgcacaaaataggtttaggagtaaaaccaagaccaaaaacagtgaa
cccagaaaacctaggaccagaatcaagtggactgaccaacaaaaacaaatcatatctgcc
atttctgagggaaattcagtgttcatcatgggctcggcaggaactggtaaaacattattg
gttaatcatattatcaaactgttgaaaaaatgtcatccccgatctggggtctttgtcaca
gcgcccactggcgttgctgcatgtgctattggtggacaaacactgcactcgtttgcaggc
attgggcctggagtgggggatcgccacactttgctagatagggttctttcagataagaag
gcttacaataggtggaaaaaagttaaggcattagttgttgatgagattagcatggttggt
gcagagttgtttgagaatcttgaattcattgcgagagagatacgtggtgaagatgaggtg
tggggtggaattcagcttgttgtgagtggagatttctttcagctaccaccagttctttgt
aagcggaatgcatcaggcaaggagtttgcattcgaagctgactgctggaatgcgagtttt
gattttcaatttgagcttactgaggtttttaggcaatcagatttgcgatttctcaagatg
cttcagggtataaggagaggggaatgtgaacctcaggacatagaatttcttgaacaatct
tgctcggtgactgagtctgagtcagatccttcggtggtacagctatatccattgaataaa
gatgtggaaacagtaaatcagatgaggatggaagacttggcagaggagggtactatatat
ttagctgttgatagtggtaacaatccttggaagaatcaactcaaacagggaatagcacct
gatgagattttcctctgcgaaggtgcaagggtgatgctgatcaagaatctgagtacttgg
cgtggactagtgaatggtgccactggtacaattataggatttcaggagccagagaatatg
gatgtgacagacatgtgttatgataacctgctaccaatagtcaaatttgattcagggcta
accatggtgattacaccagcaaagtgggttgtgatggagggagattcagttgttgctgaa
agaaagcagatacccctcagactgtcatgggctctaagtattcacaagtgccagggtatg
actcttgataaacttcaaaccaatttatccggtgcttttggctatggaatggtctatgta
gcactttcccgtgtgagaagcttagaaggccttaagttacaaggttttaggccttcgaag
attaaggcacacccaaaggttttgcaattctacaaagtttttgttagtgaacgagataca
gaagtcaagcatgatggtgccaacaagatcagtgatcagagcagtgaggtagctcatgtt
acagacacgagaagcaatggggcaacaaaatatcatttttctctttctgaattcctgtct
tcgcgccaaaaaagaaaatga
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