Castanea sativa (European chestnut): 142638655
Help
Entry
142638655 CDS
T11266
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.10 isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142638655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
142638655
NCBI-ProteinID:
XP_075668820
LinkDB
All DBs
Position
6:complement(35782231..35786143)
Genome browser
AA seq
603 aa
AA seq
DB search
MEPAVPVSYYSKSNGNHEHDDIIDWFENACENAGHVQTQTLRQILQLNYGVEYLKKWFGE
QRDNLNIQNMDACALESLFTSTVPLASHADLDPYIQRIADGDKAPLLTQQPITTLSLSSG
TTDGRQKYVPFTGHSAQTTLQIFRLAAAYRSRVYPIREGGRILELIYSSKQFKTKGGLAT
GTATTHYFASQEFKIKQEKTKSFTCSPEEVISSGDYKQSNYCHLLLGLFFSNQVEFITST
FAYSIVQAFSTFEEQWQELCNDIREGTLSPRINIPEMREAVLEIISPNPSLASKIEGCCQ
ELQNLDWCGLISRLWPNAKYVYSIMTGSMQHYLKKLRHYAGELPLVSADYGSTESWIGVN
VDPHLPPENVTFAVVPTFSYYEFIPLYRQKEDYHSAIDDFIEDKPVPLSHVKLGQQYEIV
LTTFTGLYRYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVERGSQL
LSKAGVELVDFTSHADIANQPGHYIIYWEIKGEVEEQVLSECCREMDASFVDHGYVVSRK
TNSIGPLELCIVETGTFTKILDYFIGNGAAMSQFKTPRCTSNQVILRILNVCTIKRVYSI
AYG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagctgtgccagtgagttattatagcaaaagcaatggcaaccacgagcatgat
gacattatcgactggttcgagaacgcgtgtgagaacgccggacatgttcagactcagaca
cttcgccaaattcttcagctgaactatggtgtggaatatctcaaaaaatggtttggggag
cagagagacaacttaaacatccaaaacatggatgcatgtgcattggaatcactcttcact
tccacagtgccccttgcctcccatgcagatttagatccttatattcagagaattgcagat
ggggacaaagctcctttactcactcaacaacccataacaactctctccttaagttctgga
acaacagatgggagacagaaatacgtaccctttacagggcatagcgcccagaccaccctt
cagatttttaggttggcagctgcttatagatcaagggtttatccaataagagaaggaggg
agaattcttgagctcatttacagtagtaaacagttcaaaacaaagggagggttagcaaca
ggaacagccacaacccactactttgcaagccaagagtttaagatcaaacaggaaaaaact
aagtctttcacttgcagcccagaagaagtaatttccagtggagattacaaacaatctaac
tactgtcatctccttctaggtctcttcttttctaaccaagtagagtttataacttccact
tttgcctatagcatagtgcaggcatttagcacatttgaagagcagtggcaagagttatgc
aatgatatcagagaaggaactcttagtccaagaatcaatataccggaaatgcgagaagct
gtcttggaaatcatctcccccaacccaagtttggcatccaaaatcgaagggtgttgccaa
gaattacaaaatttggattggtgtggtctaatttctaggctttggccaaatgctaagtac
gtgtattctataatgacaggttcaatgcaacattacttgaaaaaactaaggcattatgca
ggagagttgccactagtgagcgctgactatggttcaactgagagctggattggggtgaat
gtggatccccatctacccccagagaacgtgaccttcgcagtagtacccactttctcttac
tatgagttcattccactctataggcagaaggaagattaccattcagctattgatgacttc
atagaagataaacctgtcccactctcccatgtcaagcttggacaacagtacgagattgtc
cttaccacttttactgggttgtacaggtacaggttaggggatgtggtggaagtggcaggt
tttcacaaaggaacccctaaattgaactttgtatgcaggagaaagctaattttgacggta
aacattgacaaaaatactgagaaggaccttcaattagtagtggaaagagggtctcagctg
ctgagtaaggctggagtggagctggttgatttcactagtcatgctgatatagctaaccaa
ccaggtcactatataatttactgggagattaaaggagaagtggaagagcaagttcttagc
gagtgttgccgggaaatggatgcatcatttgttgatcatgggtatgttgtttctaggaaa
actaattcaattgggccactagagctttgcattgtggaaacagggacattcacgaagatt
ttagattacttcataggcaatggggcagcaatgagccaatttaagacccctaggtgcact
agcaaccaggtcatcctgagaattcttaatgtttgtaccattaaaagggtttacagcata
gcttatggttga
DBGET
integrated database retrieval system
