Castanea sativa (European chestnut): 142638763
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Entry
142638763 CDS
T11266
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142638763
03036 Chromosome and associated proteins [BR:
csaa03036
]
142638763
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
142638763
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
142638763
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
142638763
microRNA pathway
RISC loading complex
142638763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
142638763
NCBI-ProteinID:
XP_075668943
LinkDB
All DBs
Position
6:complement(30213400..30222569)
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AA seq
908 aa
AA seq
DB search
MEKSGGSEEAGGPPPPLPPPPPTIPPNVKPERVTTTTKYTITSRRGVGTTGRPIQLLSNH
FKVHVDNPDAVFYQYSVSITGEEKRVVEGRGIGRKVIDRVYQTYASELAGKRFGYDGEKS
LYTVGPLPQNKFEFQVVLDEVAKRDIGSPGGSGSPSGPSKRSKRTFQSKTFNVDISYSAK
IPLKSVALALRGADVDVNAQDALRVLDIVLRQQAANRGCLLVRQSFFHDDTRNFTSVGGG
VTGVRGFHSSFRPTQGGLSLNMDVSTTMILTPGPLIDFLLANQNVREARYIDWVKAKRML
KNVRIKTMHRNMEFKIIGLSEKPCNQQYFSMRVKNGDGASEGQTVDITVYDYFARHCGIE
LKYSAYLPCVDVGKPKRPNYLPLELCTLISLQRYTKALSSTQRASLVEKSRQKPQERIRT
LTDAMTNYKYDDDPVLAECGISIEKQLTQVEGRILETPKLKVGNSDDCIPRNGRWNFNNK
KLLNPTQIDRWVVVNFSARCDTSHISRELINCGRNKGIIIQRPYTLIEEDPQFRRASPVV
RVEKMFEQIQAKLPGAPEFILCVLPERKNSEIYGPWKKRSLSDFGIVTQCISPAKVNDQY
LTNLLLKINSKLGGINSLLAIEHSSRVPLINDTPTLILGMDVSHGSPGRSDVPSVAAVVG
SRSWPLISRYRASVRTQSPKVEMIDALYKPLEDGSDDGIIRELLVDFFQTSKGRKPTQII
VFRDGVSESQFNQVLNIELDQIIKAYQHLGEENIPKFTVIVAQKNHHTKLFQASSPDNVP
PGTVVDTKIVHPRNYDFYMCAHAGMIGTSRPAHYHVLVDEIGFSPDQLQNLIHSLSYVYQ
RSTTAISIVAPICYAHLAAQQMGQFIKFEDIPEASSSPRSGSVTNVGGVPVQELPRLHEN
VQGSMFFC
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatccggtggttccgaggaagctggtgggccaccaccacctttgcccccgcca
cctccaaccatacctcccaatgttaagccagaacgagtgaccactactactaagtatact
attaccagcaggcgtggagttgggactactggtcggcccatacagttgctctccaaccac
ttcaaagttcatgttgataatccagatgcagtgttttaccagtatagtgtatctattact
ggggaagaaaagagagttgttgaaggcagaggcattgggagaaaagtaattgatagggtt
taccaaacctatgcttctgaacttgctggtaaaaggtttggttatgacggggagaaaagc
ctgtacactgttggtcctctgccacagaacaagtttgagttccaagtggtgcttgatgag
gttgcaaaacgcgatattgggagtcctggtggtagtgggagccccagtgggccaagtaag
cggtctaaacggacgtttcagtctaagactttcaatgtagacattagttattctgcaaaa
ataccgttgaagtcagttgctcttgctctcagaggagctgatgttgatgttaatgctcag
gatgccttgagagtccttgatattgtactgaggcagcaagctgctaacaggggctgcctt
ttggtgaggcagtccttctttcatgacgacacacggaacttcacaagtgttggaggaggt
gttactggtgttcggggcttccattccagcttccgtccgacacagggtggcctgtctctt
aatatggatgtgtctacgacaatgatcctaacacctggacctctgattgactttctattg
gctaaccagaatgtacgggaagctcgctatatcgactgggtaaaggctaagagaatgctg
aaaaatgttaggattaagacaatgcaccgaaacatggaattcaaaataattggcttgagt
gagaaaccatgcaatcagcaatacttttctatgagagtgaaaaatggggatggtgcaagt
gaagggcagactgtggacatcactgtctatgattatttcgctagacactgtggtatagag
cttaaatattctgcatacctgccatgtgttgatgtcggcaagccaaaaaggcccaactat
ctgccactggagctctgtacactaatttcccttcaacgctatacaaaagcattatcttcg
acgcagagggcatcattagttgaaaaatcaaggcagaagcctcaggagagaattagaact
ctgactgatgctatgacaaactacaaatatgacgatgatcctgtgcttgctgagtgtggt
atttctatagagaaacaattgactcaggttgagggtcgcatccttgagactccaaagttg
aaggttggtaacagcgatgactgcatccctcgtaatgggcgatggaatttcaataacaag
aaacttttgaaccctactcaaattgaccgctgggtagttgtcaatttctctgcacgctgt
gatactagtcatatttcacgggagcttatcaactgcggaaggaataagggcattattatt
caacgaccatatacactaattgaggaagatccacaatttagaagagccagccctgttgtc
agagttgaaaagatgtttgaacagatacaagcaaaacttcctggtgcacctgaattcatc
ctttgtgtcttgccagagaggaaaaactctgaaatttatgggccttggaagaagagaagt
ctgagtgactttggtatagtcacacaatgtatttcccctgctaaggttaacgatcagtac
cttactaatctgcttcttaagatcaattctaagcttggaggtataaattctttgttggca
atagagcactcctcacgtgttcccctgataaatgatactcctacattgattttggggatg
gatgtctcgcatgggtctcctgggcgatcagatgtcccatctgttgctgcggttgttggc
tctcgaagttggccactgatttcaaggtatagagcatctgtaagaacacagtcacctaaa
gtggagatgattgatgctttatacaagcctttagaggacggtagtgacgatggtatcatc
agggaactgcttgtggacttctttcaaacaagcaaggggcggaaaccaactcagattatt
gtgttcagggacggagtgagtgaatcacaatttaaccaggttttgaacattgaactggat
caaatcataaaggcataccagcatcttggggaggaaaacattcccaagttcacagtgatc
gtggctcagaagaatcatcatacaaagctatttcaagctagttcccctgataatgttcca
cctgggactgttgtggacacaaaaattgtgcacccaaggaattatgatttctacatgtgt
gctcatgcagggatgattggaacttctaggccagcacactatcatgtcttggttgatgag
attggtttctcacctgatcaattgcaaaatctgatccattcactatcatatgtgtaccaa
aggagtacaactgcaatttcaattgtggcaccaatatgttatgcccaccttgctgcacaa
cagatgggtcagttcattaagtttgaagacattccagaagcctcctcctctccaagaagt
ggaagtgtcactaatgtagggggtgtgcctgtccaagagctccctaggttgcatgagaat
gtccagggttccatgttcttctgttga
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