Castanea sativa (European chestnut): 142639388
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Entry
142639388 CDS
T11266
Name
(RefSeq) actin-related protein 6
KO
K11662
actin-related protein 6
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142639388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csaa03036
]
142639388
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csaa04812
]
142639388
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
142639388
SWR1 complex
142639388
Cytoskeleton proteins [BR:
csaa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actin-related proteins
142639388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
DUF1489
MreB_Mbl
CATSPERE_NTD1
Motif
Other DBs
NCBI-GeneID:
142639388
NCBI-ProteinID:
XP_075669693
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Position
1:complement(78135849..78139097)
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AA seq
448 aa
AA seq
DB search
MSSSFSYPDFSNVVVLDNGGGLIKAGLGGERNPSTVLPNCLLRPISSKKWITPPPTTTLP
NSDPLDLTSAAVRRPLDRGYLINPDLQREIWAHLFTTLLRVTPSHSSLLLTEPLFTLPSI
QRATDELVFEDFNFKSLYVADSPSLAHLYEASRSGPTGRLVSKAQCSLVVDCGFSFTHAA
PVFQNFTLNYAVKRIDLGGKALTNYLKELVSYRAVNVMDETFLIDDVKENLCFVSLDVPR
DLHIARKTGRDNLYRCTYVLPDGVTHTKGFVKDPEQAKRYLSVPHGDAPSQLEANKKEMD
EVTERSENRKREVDFSKNEFDLTNERFLVPEMLFRPADLGMNQAGLAECIVRAVNACHPH
LHPVLYESIILTGGSTLFPRFAERLERELRPLVADDYQVNITTQEDPILGVWRGGSLLAS
SPDFEAMCVTKAEYEELGSARCRRRFFH
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatctttctcctacccagacttctcaaacgtggtagtcctcgacaacggcggc
ggcctcataaaagccggactaggcggcgaacgcaacccctccaccgtcctcccgaactgc
ctcctccgccccatctcctccaaaaaatggatcacccctccacccaccaccaccctcccc
aactccgaccccctagacctcacctccgccgccgtccgccgcccactcgaccgcggctac
cttataaacccagacctgcaacgcgagatatgggcccacctcttcaccacactcctccgc
gtcaccccttctcactcctccctcctcttgaccgaacccctcttcactctcccttccatc
caacgcgccaccgacgaactcgtcttcgaagacttcaacttcaagtccctctacgtggcc
gactccccttccttggcccatctctacgaggccagtcgatctgggcccacgggccgcctc
gtctccaaggcccaatgtagcctcgttgtcgactgtggcttctccttcactcacgccgcc
cctgtgtttcaaaacttcacgctcaactacgccgtcaaacgaatcgaccttggtggtaaa
gccctcactaattaccttaaagagctcgtgtcttatcgcgccgttaacgttatggacgag
actttcttgatcgacgatgttaaagaaaacctctgctttgtctcccttgatgtcccacgt
gacctccacatcgcaaggaagactgggagagacaatttgtacaggtgcacgtatgtgctt
ccagatggggttactcacaccaagggctttgttaaggacccggaacaggcaaaaagatac
ttgtctgtgccacacggggacgcaccttcacaattagaggctaataagaaggaaatggat
gaagttacagagaggagtgagaaccggaagagagaagttgatttctcaaaaaatgagttt
gatttgacaaatgagcggttccttgtccctgagatgctctttcgtcctgcagatttagga
atgaaccaagccggactagcagagtgcattgttcgagctgtcaatgcttgccatcctcat
cttcaccctgtactctatgaaagcattattttgactggtggaagcacgttatttcctcga
tttgctgagagactagagagggagctccggcctcttgttgctgatgactatcaagtgaac
ataacaactcaagaagatcccatactaggtgtctggagaggggggtcgctgttggcatct
agtcctgattttgaagcgatgtgtgtcactaaagctgagtatgaggagcttggatctgca
aggtgtcggaggagattcttccattga
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integrated database retrieval system