Castanea sativa (European chestnut): 142639751
Help
Entry
142639751 CDS
T11266
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00040
Pentose and glucuronate interconversions
csaa01100
Metabolic pathways
Module
csaa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142639751
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
142639751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
EXO84_helical
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142639751
NCBI-ProteinID:
XP_075670004
LinkDB
All DBs
Position
6:28926736..28928617
Genome browser
AA seq
392 aa
AA seq
DB search
MGLRLNIAMILMLLLLKSIGNVQASIFDVKQYGAKTNADISQALTKAWKAACASTGQSKV
VVPGGTYMLGAVPLEGPCKGPIELQVLGTLQAPEQQTGDSWVSFNHVDFFSLSGSGTFDG
QGKIAWGQSECSKNKYCKQLPINIRFNFITNAIIRDITSLDSKQFHINVLGCKNVTFERI
TIKAPETSVNTDGIHVGRSTGIHIIDTNIGTGDDCVSLGDGSQDITVEKVNCGPGHGISI
GSLGKFPNEEPVSGVKVIGCTLTNTMAGVRIKTWPASSTGSASNMHFEDIIMDNVGNPII
IDQVYCPWNQCQAKMPSRIKISNVSFVNIRGTSKFKEAVKLVCSKGVPCEKVELRDIDLK
YNGHDGPPTYHCINVKPTISGNQNPPACTVKA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgagactgaatattgcaatgatattaatgctactcttgctaaaatccattggc
aacgtccaagccagtatctttgatgtgaaacagtatggagcaaaaactaatgccgatatc
agccaggctttgacaaaagcttggaaagctgcatgcgcatcaacgggtcagagtaaagtt
gtggttccaggagggacatacatgttgggcgcagtgcctttggaaggtccttgcaagggt
cctatagagcttcaggttctaggcaccttacaggccccagaacaacaaactggggatagc
tgggtcagttttaaccatgtcgacttttttagtttgtcgggcagtggaacttttgacggc
caaggaaaaatcgcttggggtcaaagtgaatgttccaaaaataagtactgcaagcaactt
cctattaatataaggttcaacttcatcaccaatgcaatcatccgggacataacatcattg
gacagcaaacagttccacattaatgttttggggtgcaaaaatgttacattcgagcgtatt
accataaaagcacctgaaactagtgtcaacactgatggaatccacgtagggcgttcaaca
gggatccacataattgatacaaatattggaaccggagatgattgtgtctcgcttggtgat
ggaagccaggatataactgttgagaaagtaaattgtggacctggccatggaataagcata
ggaagtcttggaaagttcccaaatgaagaacctgtgagtggtgtcaaagtcattggctgc
actcttactaatacaatggctggtgtaagaatcaaaacatggcctgcttcctcgactggc
tctgcctctaatatgcattttgaggacattatcatggataatgttggcaatcctatcatt
attgatcaagtttactgcccatggaatcagtgccaagcaaagatgccctctagaattaag
atcagcaatgttagcttcgtaaacattcgaggcacatctaagtttaaggaggctgtcaag
cttgtttgtagtaagggcgtgccatgtgaaaaagtggagcttcgtgacatagacctcaag
tacaacggacatgacggccctcccacataccactgtattaatgtcaagcccacgatttct
ggcaatcagaatcctcctgcttgtactgtcaaagcttaa
DBGET
integrated database retrieval system