Castanea sativa (European chestnut): 142640410
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Entry
142640410 CDS
T11266
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
142640410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142640410
Membrane trafficking [BR:
csaa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
142640410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_8
TPR_19
TPR_14
CFAP70_TPR_C
TPR_7
TPR_9
TPR_12
RMD1-3
PPTA
CFAP70_mid_TPR
CABIN1_N
NGF
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
142640410
NCBI-ProteinID:
XP_075670600
LinkDB
All DBs
Position
6:complement(111308..127801)
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AA seq
734 aa
AA seq
DB search
MDMRDLVTGGAACAVPGSSSSSNPLAALANTLIGSSSKIQENKEIPTSITPSSERQIYAE
SNDHLGALDQPFVDPNGPQHSDFLRGFHGSGGGGGGQTELDAAWNDIHPPPQLDHIYDTH
PHPQQPILDGPPQRMLSSLLHSFVDSSRGGVPFRATPLPVLGLSEGDKQCIRDRSSIMAR
HIFADKSEDFINAQVNALLCSLDIDGDARAKGPLPGRFRELDDYWNESQGTLKPGFHAAD
GWVAEFNQQRMVHGANGWASEFEQQHGANGWASEFEQSQLTSVDQMRGSNISSLAAMEQT
RMLANTLAQNDDPKFQNSKFLQFVSKMSRGELIIDDNQVKQTALPAAGDWASEYQNQYNR
SPAWADEFLSHGPDQWVNEFTTEREQHGPVDDQWVNEFSKLHVHDWGDEFGSQVGEGALG
ENSTDNWANAYDEFLNEQVAARQRSDTSRGVYVFSDMNPYVGHPNPLKEGQELFRKGLLS
EAVLALEAEVLKNPDNAEGWRLLGIAHAENDDDQQAIAAMLRAQEADSTNLEVLLALGVS
HTNELEQAAALKYLYGWLRHHPKYGTLAPPELSDSLYYADVARLFNEAAQMSPDDADVHI
VLGVLYNLTREYDKAIESFQTALKLKPHDYSLWNKLGATQANSVHSADAIFAYQQALDLK
PNYVRAWANMGISYANQGMYEDSIRYYVRALAMNPKADNAWQYLRISLSCASRDDMLEAC
DSRNLDVLQKEFPL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcgtgatcttgtaaccggtggagcagcttgtgcagttccaggctcttcttcg
tcttctaatcctcttgccgctctcgccaacactcttattggctcttcttctaagattcag
gaaaataaggagattcctacatctataacccccagttccgagaggcaaatttacgcagag
agcaatgaccatctgggagcccttgatcagccatttgtggaccccaacggccctcaacac
tccgactttcttcgcggctttcacggttcaggaggaggaggaggaggtcagactgaactt
gacgccgcctggaatgatatacaccctcctcctcaattggaccatatctatgatactcat
cctcaccctcaacaaccaattctcgatgggccaccccaaagaatgttgtcaagccttttg
cactcctttgttgatagcagccgtggtggagttccctttcgtgctactccacttccagtg
ttaggcttgtctgaaggtgacaaacaatgtatacgtgatcgtagcagcataatggctcgc
cacatttttgcagataaaagtgaagattttattaatgcacaggtgaatgctcttttgtgt
tctttagatattgatggtgatgctcgcgccaagggacctctgccagggagatttagggaa
ctagatgattattggaatgagtcccaaggtactctgaaacctggttttcatgctgcagat
ggatgggtagctgagtttaaccagcagaggatggtacatggtgccaatggctgggcctct
gaatttgagcaacaacacggtgccaatggctgggcctctgaatttgaacagtctcagttg
acttcggtagatcaaatgagaggttctaatatctcaagcttagctgcaatggagcagact
cgcatgcttgcaaatacgttagctcaaaatgatgacccaaagtttcagaactcaaagttt
ctgcagtttgtatcaaagatgagtcgtggtgaacttattattgatgataatcaagtcaag
cagacagcattacctgcagctggggattgggcatcagaatatcaaaatcagtacaacagg
agtcctgcttgggctgatgaatttctttctcatggtcctgatcaatgggtgaatgagttt
actactgaacgagagcaacatgggccagttgatgatcagtgggtcaatgagttctctaag
ttgcatgtccatgactggggagatgaattcgggagtcaggttggtgagggggctttgggg
gagaattctacagataattgggcaaatgcatatgatgagttcttaaatgagcaagtagct
gccaggcagcggtctgacacttcaaggggagtatatgtcttttctgatatgaatccttat
gttggtcacccaaatcccctgaaagaaggccaggagctgttccgcaaaggcctactgagt
gaagcagtgcttgcattagaggctgaagttttgaaaaaccctgacaatgctgaaggttgg
aggctgcttggaatagcacatgcagagaatgatgatgatcaacaggctattgcagccatg
ttgcgggcacaggaggcagattctacaaatctggaagtgcttcttgctcttggtgtgagc
catacaaatgaacttgagcaggcagctgcattaaaatatttatatggatggctacgtcat
cacccaaagtatgggacacttgcccctccagagctgtctgattctttatattatgctgat
gttgctagattattcaatgaagctgctcaaatgtcacctgatgatgctgatgtgcacata
gtgcttggtgtcctatacaatttgaccagggagtatgataaagccattgaatcttttcag
acagctttgaaactcaagcctcatgattactctctgtggaacaagcttggtgcaacacaa
gcaaacagtgtccacagtgctgatgcaatatttgcttatcaacaggcactagatctaaaa
cctaattatgttcgtgcatgggcaaacatgggtatcagttatgccaaccagggcatgtat
gaggactccattcgctactatgtccgggcactcgctatgaatcccaaggcagacaatgca
tggcaatatttgcgaatttctctgagctgtgcttctagggatgacatgctggaagcttgt
gattctcgaaaccttgatgttctccaaaaggaattcccactgtaa
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