Castanea sativa (European chestnut): 142640414
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Entry
142640414 CDS
T11266
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142640414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142640414
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
142640414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
142640414
NCBI-ProteinID:
XP_075670603
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All DBs
Position
6:6679980..6684569
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AA seq
478 aa
AA seq
DB search
MESDLGKLFIGGISWDTDEERLKDYFRKYGEVVEAVIMRDRATGRARGFGFVVFADPAVA
ERVIMDKHIIDGRTVEAKKAVPKDDQHILNRTPGSVHGSPGPGRTKKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLLKQFHELNGKMVEVKR
AVPKELSPGSSRSPIVGYNYNMSRANSFLNNYVQGYNMSPVGGYGVRMDGRFNQVASGRS
GFSPFGTTGYGMSLNLEPGLSPSYGGNSNFGNSLGYARMLSPYYSGNSNRYSTPIGYSGG
NGRNDSLLSSTTRNVWGNGGLNNAVNSSSPGAYLNSGSGGFGVFGNSGANWGPSPGSTQG
GGSPPGYTSGNIGYGSGDNSFGLGAGGGYGRNSGTGLAQSSSFAASSGSYEGSYGDLYRS
GSVYGDSTWRSTTPELDGSSSFGYALGNMSSDVTAKSSEGYIGSYNVTSRQANRGIAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatcttggaaagctcttcattggcgggatttcttgggacacagatgaagaa
agacttaaggactattttaggaaatatggggaggtggtggaagcagtgatcatgagagat
cgtgccaccggtcgtgctcgtggctttggtttcgttgtctttgcagatcctgctgttgca
gaaagagtcatcatggacaagcacataattgatggccgcactgttgaggcaaagaaggcc
gttcctaaggatgatcagcacattttaaatagaacccctggtagtgttcatggttctcca
ggcccaggacgtaccaaaaagatttttgtgggaggtttagcatccacagtcactgagagc
gactttaagaaatacttcgatcagtttggtacaattaccgatgttgtagtgatgtatgat
cacaacacccaaaggccaagaggctttggcttcatcacttatgattctgaggatgcagtg
gatagagtgctcctcaaacagtttcatgaattgaatggtaaaatggttgaggtgaagagg
gcagtcccaaaagaactatccccaggttccagtcggagccctattgtaggatataactat
aatatgagtagggccaatagcttccttaacaattatgttcagggttataatatgagcccc
gttggaggttatggagtcaggatggatggtaggtttaatcaggttgctagtggtcgtagt
gggttttccccatttggtacaactggttatggaatgagtctgaatttggagccagggttg
agcccaagctatggtggcaattccaactttggcaatagtcttggctatgcacggatgctg
agtccttattatagtgggaattcaaacaggtatagcactcctattgggtatagtgggggt
aatggaagaaatgattctctactaagctccacgactcgaaatgtctggggaaatgggggc
cttaacaatgctgtgaactcttcaagccctggtgcttatttgaactctggaagtgggggt
tttggagtttttggaaatagtggtgccaattggggcccttctcctggttcaactcaaggt
ggagggagtcctcctggttatactagcgggaatattggttatggcagtggagacaacagc
tttgggttgggagctgggggagggtatggaagaaacagcggcacaggtttagcccaatct
tcatcatttgctgcatcaagtggaagctatgagggatcctacggtgacttgtatcgtagt
ggttctgtttatggcgattcaacttggcgatctactactcctgagctagatggttctagc
tcatttggttatgcgcttggcaatatgtcttcagatgtcacagccaaaagttctgagggt
tatattggaagttacaacgttacaagtagacaagcaaatagaggaattgctacatag
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