KEGG   Castanea sativa (European chestnut): 142640569
Entry
142640569         CDS       T11266                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142640569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csaa03019]
    142640569
   03041 Spliceosome [BR:csaa03041]
    142640569
Messenger RNA biogenesis [BR:csaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     142640569
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     142640569
Spliceosome [BR:csaa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    142640569
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_RdRP1_2 BRAP2
Other DBs
NCBI-GeneID: 142640569
NCBI-ProteinID: XP_075670845
LinkDB
Position
6:3455874..3459107
AA seq 347 aa
MGSKSRADNPHSGDGASPGKIFIGGLHKETSFGAFRSYFEKYGEITDAVIMRDRYTNQPR
GFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSAVTE
DELKNFFSKYGKVVEHQIIRDHETHRSRGFGFVIFDNDEVVDEMLTKGNMIDMAGTQVEI
KKAEPKKASNPPPAPAYGSNSRSRSFNDGFGGFGNSYGGFDGGFGPGPYRTPGSLGSRLG
GGYGYGGGSGEYGGGYGGFGASSLGGYRSESSLGYSSRFAPYGGGFGGSYGSGLGGYGRG
SEGYGSYGSSGYGAGYDSGPGASYGGAGGLYGRGGYSGTSRYHPYAR
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgggttcgaaatccagggccgataatccacactccggcgatggtgccagccccgggaag
atcttcattggaggattgcacaaagagacaagctttggggcttttaggagttactttgag
aaatatggagaaataacagatgcagtgataatgagagatcggtatactaatcagcctagg
ggttttgggttcgtcacttatgctgatccttcagtagttgacaaggtcattgaagacacc
catatcatcaatggcaaacaggttgagataaagaggaccattcccaagggccaagggcag
tcaaaggattttaaaacaaagaagatatttgttggtgggattccatcagcagtcactgaa
gatgagttgaagaatttcttttccaagtatgggaaggtggtggaacaccagattatacgt
gatcatgaaactcatcgttcccgaggctttggatttgttatttttgacaatgatgaagtt
gtagatgaaatgttaacaaagggaaatatgattgatatggctggtacccaggtggagatc
aagaaagctgaaccaaagaaagcctcaaacccaccacctgctccagcatatggtagcaac
tctaggtctcgttctttcaatgatggctttggtggttttggcaattcttatggaggtttt
gatggagggtttggtccaggtccctataggactccaggaagtcttggcagtaggcttggt
ggtggatatggttatggcggtggtagtggcgaatatggtggtggttatgggggttttgga
gccagtagcttaggtggctaccgtagtgaatcttcacttggttattctagtcgctttgca
ccctatggtggcggttttggtggcagttatggaagtggtttaggtggatatggtcgaggg
agtgaaggctatggaagttatggaagttcaggctatggtgctggttatgactccgggcct
ggcgctagttatggtggagcaggtgggctgtatggaaggggaggctatagtggcactagt
cgctaccatccctatgcgaggtag

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