Castanea sativa (European chestnut): 142640777
Help
Entry
142640777 CDS
T11266
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04142
Lysosome biogenesis
csaa04145
Phagocytosis
csaa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
142640777
04142 Lysosome biogenesis
142640777
04148 Efferocytosis
142640777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142640777
Membrane trafficking [BR:
csaa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
142640777
Hops complex
142640777
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
DUF2067
Motif
Other DBs
NCBI-GeneID:
142640777
NCBI-ProteinID:
XP_075671150
LinkDB
All DBs
Position
6:complement(51739353..51750244)
Genome browser
AA seq
595 aa
AA seq
DB search
MAQIPNLDNAPLNLTSLREQSQKELLNILKNIRGKKCLVIDPKLGSSLSSIIQTSLLKGH
GVELRHLSAEPLQTDCTKVVYLVRSQLDLMKFICSNVHDDVSKGLQREYFVYFVPRRTVV
CEKILEEENVYNLMTIGEYPLYIVPLDEDVLSFELDLAYKESQVDGDTSSLWHIAKAIHK
LEFSFGVIPNVRAKGKASVRVADILNRMQAEEPVNSPDMVVPEINTLVLLDREVDMVTPM
LTQLTYEGLLDECLHVNNGSVELDASIMGLQQEGKKIKVPLNSSDKLFKEIRDLNFEVVV
QILRQKATSMKQDYTEVTTTTQSVSELKDFVKKLNSLPEMTRHINLAQHLSTYTSKPAFL
GQLDMEHTIVEAQSYDICFEYIEELIHKQEPLVNVLRLLILFSITSSGLPKKQFDYLRRE
LLHSYGFEHMATLNNLEKAGLLRKQESKSNWLTIKRALQLVVEDTDTANPNDIAYVFSGY
APLSIRLVQHAVRSGWRPIEEILKLLPGPHSETKRGRFSSSPSYDTLQAPANIDKVADGR
RSLVLVVFIGGITFAEISALRFLSAQEGMAYDLIVGTTKIVSGHSLAETFVERLG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattccgaacctagacaatgctcctctcaatctcacatctctcagagaacag
tcacagaaggagctcctaaacatcctcaagaatattcgagggaaaaagtgcttggttatt
gatccgaagctcgggagttctctctcatcgatcatacaaacatcgcttcttaagggacat
ggggttgagttgcggcatctttcagctgaaccacttcaaactgactgcaccaaagtggtt
taccttgtccgttctcagctcgatttaatgaaattcatatgttcaaatgttcacgatgat
gtctcgaagggacttcaaagggaatactttgtttattttgtccctcgccgcacggttgta
tgtgagaagatccttgaagaggaaaatgtttataatttgatgactataggggagtaccca
ttgtacatagttccattggatgaggatgtattatcatttgaacttgaccttgcttataaa
gaaagccaagttgatggtgatacaagctcactttggcatattgctaaagccattcacaag
cttgagttttcttttggagtgataccaaatgtgagagccaaaggcaaagcatcagtgcgt
gttgcagacattctaaaccgtatgcaagcagaggaacctgttaactcacctgatatggtt
gtgccagagataaatacgctcgtccttttagatagggaggtggacatggttactcctatg
ttgactcaattaacatatgaggggctacttgacgagtgtctgcatgtcaataatggttct
gtggagctggatgcatctatcatgggtctccaacaagagggaaaaaagataaaagttcca
cttaattcgagtgacaagctgtttaaggagatacgggatctcaacttcgaagttgttgtc
cagattctacgtcagaaagcaacatccatgaagcaggactacacagaagtgacaacaact
acacagtcagtttctgaattaaaggactttgtcaaaaagctgaactcgttgccagaaatg
actaggcacataaatcttgctcagcatctgtcgacatacacatcaaagccagcctttctt
gggcaactggacatggaacacacaattgttgaggcacagagttatgacatatgctttgag
tacattgaagaattgatccataagcaggagcctcttgtcaacgtcctacgtcttctcatc
ttattttccattacaagttctgggttgcccaaaaagcagtttgactatttgaggagagaa
ctactccacagctatggatttgagcacatggcgacactgaataatttagaaaaagctggg
ttgctcagaaagcaggagtcaaaaagcaactggttgacaattaaacgtgctctacaactt
gttgttgaggacactgatacagccaacccgaatgatattgcctacgtattttctggatat
gcacctcttagtattcgtcttgttcagcatgctgtgcggtctggatggcgtcctatagaa
gaaatactgaagctgctaccaggaccacattcagaaacaaaaaggggcagattctcaagc
agtccatcgtatgacaccctgcaggctccagctaatatagacaaagttgctgatggaagg
cggtctctagttctcgttgtcttcattggaggcataacatttgcagagatttccgctctt
cgatttctcagtgctcaggaagggatggcatatgatttgattgttgggacaaccaaaatt
gtcagtgggcatagcttagctgaaacatttgtagagaggttgggctag
DBGET
integrated database retrieval system
