Castanea sativa (European chestnut): 142640846
Help
Entry
142640846 CDS
T11266
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142640846
03036 Chromosome and associated proteins [BR:
csaa03036
]
142640846
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
142640846
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
142640846
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
142640846
microRNA pathway
RISC loading complex
142640846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
142640846
NCBI-ProteinID:
XP_075671264
LinkDB
All DBs
Position
1:75518693..75533630
Genome browser
AA seq
926 aa
AA seq
DB search
MLMKDPKENPVISREPLLNSMKENNEDFMKDTKKIIARRRGRRGGKGPKVEKLQVEKLNT
DVGSPASCKSLMFHRRPGYGQLGTKCLVKANHFIANIPDSDICHYSVKIDPEVTSHKLNK
AIMTQLVKLHRESDLGMRLPVYDGARNLYTAGFLPFTTKNFIIILSDDEEGACNRREREF
KVTISFITLASMQQLRELLAGKPVDTPHKALTIIDIVLRQLAAQRYVSVGRFLYSPDIKK
PQQLGGGLESWRGFYQSIRPIQMGLSLNIDMSSTAFIEPLPVIDFVAQILDKDVYSRPLS
DADRIKVKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPVDEQKNMKSVVEYFQE
VYGYTIQYSHLPCLQVGNQKKVNYLPLEACKIVGGQRYTKGLNEKQITSLLKVSCQRPHE
QEMDILQTVHQNDYEKDPYAKEFGISIDNKLASVEARVLPAPWLKYHDTGKEKEYLPQVG
QWNMMNKKVINGSTVRHWACINFSKTVQESTACSFCQQLVQMCQISGMEFNRDPVIPIYS
ARPDQVKKALKYVYYAAASKLEGKELELLIAILPDNNGSLYGDLKRICETELGLISQCCL
TKYVFNSSRQYLANVSLKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPETGD
DSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKTWKDPQRGMVTGGMIRELLL
SFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFIVVQKRH
HTRLLANNHNDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLW
DENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPGVHENAKTRC
TRATNGSCVRPLPALKEKVKNVMFYC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgctaatgaaagaccctaaggagaaccctgtgatatccagggaacctctactgaactca
atgaaagagaacaatgaagacttcatgaaagatacaaagaagattatagcaaggagaagg
ggaaggagaggaggtaaaggaccaaaagtggagaaattgcaagtagagaagctaaatact
gatgtggggtcccctgcttcatgcaaaagccttatgttccatcgtagacctggctatggc
caactggggacaaagtgtttagttaaagccaatcacttcattgcaaacataccagactcg
gatatatgtcactatagtgttaagattgaccctgaggttacttctcataaattgaacaaa
gctatcatgacccagttggtgaaacttcatagagagtcagacttggggatgaggctccct
gtctatgatggagcaagaaacttatacacagctggatttctgccttttacaacaaaaaac
ttcatcataatattgagtgatgatgaggagggggcatgcaatagaagggaacgagaattt
aaagtgacgataagttttataactttagctagcatgcaacaattacgtgagcttcttgct
gggaagccagttgatacccctcacaaagcacttaccattattgatattgtcttaaggcaa
ctagcagcccaaaggtatgtatcagttggaaggtttctctattctcctgatattaagaaa
ccacagcaattgggtggtggcttagaatcatggcgaggattctaccagagtattaggcct
attcagatgggactgtccctgaatattgacatgtcatcgactgcgttcattgaaccactc
cctgtcattgattttgttgctcagattttagataaagatgtgtattcaaggccattatca
gatgctgatcgtattaaggttaagaaagcccttagaggtgtcaaagtagaagttacacat
agaggaaatgttcgaaggaaataccgcatttcagggttgacatcacagcctacaagggag
ctaattttcccagtagatgagcaaaagaacatgaaatcagttgttgagtactttcaagag
gtgtatggatataccattcaatattctcatctaccttgtcttcaagtgggaaatcaaaag
aaggtgaactatttgccattggaggcttgcaagatagttggcggacagagatacactaaa
gggctgaatgagaagcagataacttctctgctaaaagtttcatgccaaagaccccatgaa
caagaaatggacattttacagacagttcatcaaaatgactatgagaaagatccctatgca
aaggaatttggcatcagtatagacaacaagcttgcatctgttgaggctcgggttcttcca
gctccatggcttaagtatcatgatactggaaaggaaaaagaatacttgcctcaagttggt
cagtggaatatgatgaacaagaaagtaataaatggaagcactgtcagacattgggcttgc
atcaacttctcaaaaaccgtccaagagagcactgcttgtagtttctgtcaacagttggtt
cagatgtgccaaatttctggcatggaatttaaccgggaccctgtaattccaatatattca
gccagaccagatcaggtaaagaaggccttaaaatatgtgtattatgctgctgcaagcaag
ctagaaggaaaagagttggagttgcttattgccattcttccagacaacaatggctcttta
tatggtgatctaaaacgaatttgcgaaacagagctggggttgatttctcagtgctgcctt
acaaaatatgtcttcaactctagcagacagtatctggcaaatgtatcacttaaaatcaat
gtcaagatgggaggaagaaataccgtgcttttagatgctctaagttggaggattcctttg
gtcagtgacattccaacaataatttttggagctgatgttactcatccagaaaccggagat
gattcttgtccatctatagctgctgttgtagcttcccaagattggccagaagttacaaag
tatgccggcttggtatgtgcacaacctcatcgagaagaacttatccaagatttgttcaaa
acctggaaagatcctcaacggggtatggttactggaggcatgatcagagagcttttactt
tcatttaagaaggccactggacaaaaaccattgagaataatattttacagggatggtgtt
agtgaaggacaattctaccaggtcttactatatgaacttgatgccattcgtaaggcttgt
gcatcattggaacctagttaccaacccccagtaacatttattgtggttcaaaagaggcac
cacaccaggctcctcgcaaacaatcacaatgacagaagtagcactgacaagagtggaaat
atcttacctggtactgtggtggattcaaagatttgtcatcctactgagttcgacttctat
ttatgtagtcatgcaggaatccaggggaccagtcgaccagctcattatcatgttctctgg
gatgagaacaattttactgcagatgaaattcaatcactgaccaacaacctgtgttatacg
tatgctcgatgcactcgatctgtttctgtagtgcctccagcatattatgctcacctggca
gcttacagagctcgattctacatggaacctggtgtgcatgagaatgctaaaacgcgttgc
acacgggccactaatgggtcatgtgtccgtcctcttccagctttgaaagagaaggtgaag
aatgtgatgttttactgctag
DBGET
integrated database retrieval system
