Castanea sativa (European chestnut): 142640962
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Entry
142640962 CDS
T11266
Name
(RefSeq) anaphase-promoting complex subunit 1 isoform X1
KO
K03348
anaphase-promoting complex subunit 1
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142640962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142640962
03036 Chromosome and associated proteins [BR:
csaa03036
]
142640962
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
142640962
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
142640962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APC1_5th
ANAPC1
APC1_4th
APC1_C
Apc1_MidN
APC1_3rd
PC_rep
ASFV_p49
Motif
Other DBs
NCBI-GeneID:
142640962
NCBI-ProteinID:
XP_075671417
LinkDB
All DBs
Position
6:complement(43392159..43418890)
Genome browser
AA seq
1821 aa
AA seq
DB search
MSVRVRRLTVLGEFKPFGLIAEALDGKPADNVTDKYDYFLFDPEVARERDESGEQHASGS
AFSDRSDHELFIRGSRIIWTIGSRVFKRFTLPSPIIKVCWCRLGNMAEALLCVLQIESLT
IYNTSGEVVSITLPRTIASIWPLPFGLLLQQAAEVHSPTHSPFSCSSPLLGVRDVHRRRR
ETSHSPQHNLNFLSGSDYNCKGDTGSISSHLILKDPLEEPQLTFIEERGKLNIMKEFDER
TIWTSDQIPLMASYNKGKMQHSVWVAEAVNSNIELADSSSTDVVPAGVLPKQFSFRRIWQ
GKGAQTAACKVFLATDNDAAPVICFLHQEQKKLLSVRLQSVEINNEILFDIKPDMSWSIP
AVAAEPVIVTRPRVKVGQLSYADIFVLNPENALLLYSGKQCLCRYMLPSCLGKSQPLLNL
DFPDTSSVSHDLKIIGLADAVEGRINVIVNNGQMFRCVFRRSPSSLLADDCITAMAEGLS
SSFYSHFLGLLWKDGDSAYLSNADSSVNLEWESFCTIITQMCKSSVDTQDFVNSVPQSSW
EFLISSKFHKNYELNLITGTSCEMSLDVLGFLPRSHSDATQSLQKSFYSEVLMECLDSLH
AVYESLKLDILRKRDLELLAVLLCSIANFLSEESYLDHYVRDFPGLSKKFGMDMTSCSWK
IPPSLFRWLENCLQHGSSVANIDDLPSLICKDGSPVVSWARKIVSFYSLLSGAKRIGKKL
STGVYCNIAMGSHCTHEELTVLAMVGENFGLQQLDSLPSGVSLPLRHALDKCRESPPSDW
PAAAYVLLGREDLALSCLACSRKSRELETQTNVNLISMSTPYMLHLHPVTIPSAVSDTIG
LESTKFEDTDSVDGSMTDGMEHIFNSSTQLRYGRDLRLNEVRRLLCSTRPVAIQTAVNPS
ASDQDLQQAQLWNLAQRTTALPFGRGAFTLATIYTLLTEAFTVPKLVLAGRLPAQQNATV
NLDPNLRNIQEIKSWPEFHNAVAAGLRLAPLQGKMSRTWIIYNKPEEPSAVHAGLLLALG
LHGYLRVLNLTDIYQYYQQEHESTTAGIMLGLAASYRGTMQPGISKSLYLHIPSRHPSSF
PELELPTLLQSAALMSVGILYEGSAHPQTMQILLGEIGRRSGGDNVLEREGYAVSAGFSL
GLVALGRGGDTLGCIDSMVDRLFHYIGGKEARNERSFLTLLTEEQNRGTAQMMDGTSVNV
DVTAPGATIALALMFLKTESEAIMSKLSIPNTRFDLQYVRPDFIMLRVIARNLIMWSRIH
PSKDWIQSQIPEIIQHGVKGLRDDSGDIDDMDAEAFVQAYVNIVAGACISLGLRFAGAKN
GNAQELLYEYAVYFLNEIKPVSATSGNTFPKGLSHYIDRGTLEICLHLIVLSLSVIMAGS
GHLQTFRLLRFLRSRNSADGHANYGIQMAVSLAIGFLFLGGGMRTFSTSNSSVAALLITL
YPRLPTGPNDNRCHLQAFRHLYVLATEARWIQTVDVDTGLPVYAPLEVTTRETELYAETS
FCEVTPCLLPERAVLKTIRVCGPRYWSQVIDLCPEDKPWWTFRDKNSPFNSGVLYIKRKV
GACSYVDDPVGCQSLLSRAMHKVFGLTSSTAFDPCISSGSGPGSITVDQLVSTFSSDPSL
IAFAQLCCDPSWNSRSDVDFQEFCLQVLFECVSKDRPALLQVYLSLYTTIASMADQVTSG
TVVLSDSIFISSLKLALTYTEALLSGRLTTSRGGIVQSKFIGSLRKRVDELLNFSPGLKD
DFCNYLNSGKWPIMESEREKGAILLSWYLQWFGVPAPFVIKTAAERIKPKLMSSSLTPFL
RLLFPSTHINAIGEIDKFLSC
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcagggttcgccgcctcacagtgctcggcgagttcaagcccttcggcttaatc
gccgaagccctggacggaaagcccgccgataatgtcactgacaagtacgattactttctc
ttcgaccccgaagtcgctcgggaaagagacgaatccggcgaacaacacgcttcgggctcc
gcgtttagcgatcggagcgatcacgagcttttcatcagagggagccggataatatggaca
ataggttcaagagtatttaagagattcaccttaccctccccaattatcaaggtgtgctgg
tgtcgtctgggtaatatggctgaagctcttctctgtgtcttacaaattgagtctttaaca
atctacaacacatcaggtgaggtagtatctattacacttcctcgtaccattgcatcgata
tggcctcttccatttggcttattacttcagcaggcagctgaagtgcattccccaacacat
tctcctttttcatgttcaagtcctttattaggtgtacgtgatgtacaccgtcgtaggaga
gagaccagtcatagtccacaacataatctcaattttctgagtggatctgattataattgt
aagggagacactggttcaatatcttcacatctaattctgaaagatccattggaggaacca
cagttgacttttattgaagagagaggaaaattgaacataatgaaggaatttgatgaaaga
acaatatggactagtgatcagattcctcttatggcatcatacaacaaaggaaagatgcaa
cactcggtctgggttgcagaagcagttaattcaaacattgaattggcagatagtagttca
actgatgtagttcctgctggtgtattaccaaaacaattctctttccgtagaatatggcag
gggaagggtgcccagacagctgcttgtaaggtttttctggcaactgataatgacgcagct
cctgtaatttgttttcttcaccaagagcaaaagaagttgttgtctgtacggctacaaagt
gtcgaaattaataatgagattctctttgatataaaacctgacatgagctggagcatacct
gcggttgcagctgaacctgtgattgtcacgcgcccaagggttaaagtgggacagctatcg
tatgcagacatctttgtcttgaatccagaaaatgcccttcttctttattcaggaaagcaa
tgcctgtgtaggtatatgttaccttcgtgtttgggtaaaagtcaacctttgcttaatttg
gattttccggacacatcatctgtgtcccatgacttaaagattattggattggctgatgct
gttgagggacgtatcaatgtaatagtaaataatgggcagatgtttcgatgtgtatttcga
agaagcccatcatctttgttggcagatgactgcatcacggcaatggctgaagggctcagt
tccagtttctatagtcattttctaggtcttctttggaaagatggcgactctgcctattta
tcaaatgctgattctagtgttaatttagaatgggaatcattctgtactattattacgcaa
atgtgtaaaagctctgttgacactcaagattttgtaaattcagtgccacagtcatcttgg
gagtttcttattagcagcaaatttcacaagaactacgaacttaacttgattactggaact
tcttgtgagatgtcacttgatgtgctgggatttttacctaggtcacattcggatgctaca
caaagtttgcaaaaatcattttactctgaagtattgatggagtgtttggattctttgcat
gcagtttatgagagtcttaaactggatattcttcgcaaaagggacttggagcttttggcg
gttctattgtgtagtattgccaatttcctgagtgaggaaagctatttagatcattatgtt
cgtgattttcctggtctctctaagaaatttgggatggacatgacttcctgctcctggaaa
attcctcccagtttattccgatggcttgaaaactgtttgcaacatggaagtagtgttgct
aatattgatgatctaccatctttaatttgtaaagatgggagtcctgttgtaagttgggcc
cggaagatagtctccttttatagcttattatctggtgccaaacggattgggaaaaagctt
tcaactggtgtttactgtaacattgccatgggatcacattgcacacatgaggagctcaca
gttttggcaatggttggcgaaaattttggactgcaacagctagactcactgccatctggt
gtatctcttcctctgcgacatgcattggataagtgtcgggaatctcctccctccgactgg
cctgcagctgcatatgttcttcttggtcgagaagatttggctttgtcttgtttggcatgc
tcacgcaaatcaagggaacttgagacacaaaccaatgtgaatttgatctctatgtctacg
ccttacatgctacatttgcatccggttacaattccttctgcagtttctgatacaattggt
ttggaaagtaccaaatttgaagataccgattctgttgatgggtctatgactgatggtatg
gagcatatcttcaactctagcacacagttgagatatggtcgtgatctgcgattgaatgag
gttcgacgccttttgtgctctacaagacccgtggcaattcaaacagctgttaaccctagt
gcctctgatcaggacctccaacaggctcagctatggaaccttgctcagaggaccactgct
cttccttttggtcggggggcatttacccttgcaaccatatatactctgttaacagaggcc
tttacagttccgaagcttgttttagcaggtcggttgcctgcccaacaaaatgcaactgtt
aatctagacccgaacttacggaatattcaagaaattaaatcttggcctgagtttcacaat
gctgttgctgctggactaaggctggccccccttcaggggaaaatgtctagaacttggata
atatataacaaacctgaggaaccaagtgctgttcatgctgggcttcttcttgcattagga
ttacatggatatctgcgagttttgaatcttactgacatataccagtattatcagcaggaa
catgagagcacaactgcaggaataatgcttggcctggcagcttcttataggggaacaatg
caaccggggatatcaaaatctctttatcttcatataccttctcgacatccatcttccttt
ccagagttggagttaccaacccttctgcagtcagcagcattaatgtcagttggaattctt
tatgaagggtcagcacatccacaaacaatgcagattttattgggtgaaattggtcgtaga
agtggaggtgataacgtacttgaaagggagggttatgcagtttcggcaggattttcattg
ggtcttgttgctttgggtcggggtggagacacacttggttgcatagactcaatggttgat
cgattgttccattatattggtggcaaagaagctcgtaatgaacgatctttcttgaccctg
ttaacagaggaacaaaatcgtggaactgctcagatgatggatggaacatcagtaaatgtt
gatgttactgcaccaggagctacaattgctcttgctttaatgtttttaaagactgaatca
gaggcaattatgtcaaagctttctatacctaatacgcgttttgacttgcaatatgtgagg
cctgacttcataatgcttcgtgtcattgctcggaatttgataatgtggagcaggattcat
ccttctaaagattggattcagtcccagattcctgaaattatccaacatggtgtcaaaggc
ctcagggatgattccggtgatattgatgacatggacgcagaagcgtttgtccaggcctat
gttaatatagtggctggagcatgtatttctcttgggttaaggtttgctggagcaaagaat
ggaaatgcacaggaattactctatgaatatgctgtctacttccttaatgagatcaagcct
gtttctgctacaagtggaaacaccttcccaaagggattgtctcactacattgatcgggga
acattagagatatgccttcacctaattgttctctccctctctgtgattatggctggttct
gggcatctacaaacctttcgattgttgagatttctccgcagcagaaattctgctgatggg
catgccaattatggtattcagatggcagtaagcttagcaattggcttcttgtttcttggg
ggaggaatgcgaacattttcaacaagcaacagttctgttgctgctttactgatcactctt
tatccacgcttgcctactggaccaaatgacaatcgatgccaccttcaggcattccggcat
ttgtatgtccttgcaacggaggctcgctggatccagacagttgatgttgatactggtcta
ccagtgtatgctcctcttgaagttacaactagggaaactgaactttatgcagaaacaagt
ttttgtgaggttaccccttgccttctgccagaacgtgctgttctgaagacaatacgcgtt
tgtggccctcggtactggtctcaagtaatagatctttgccctgaagataaaccttggtgg
actttcagggacaagaatagcccattcaattctggtgttctgtatatcaaacgaaaggtt
ggagcttgttcgtatgttgatgatcctgtaggctgtcagtctcttctgtcacgagcaatg
cacaaggtattcggcttgacaagttcaacagcatttgatccatgcattagcagtggcagt
ggacctggttccattacagttgatcagttggtcagtaccttctcatctgatcctagctta
attgcttttgcacaactctgctgtgatccttcctggaatagcagatccgatgttgatttc
caggaattttgcttgcaagtattatttgagtgtgtgagtaaggacaggccagctcttcta
caggtgtatttgtcactttatacaacaattgcgtctatggctgatcaggttacaagtggt
actgttgttttaagtgactcaatctttatctctagtctaaagcttgcactaacctacact
gaagctctgttgagtggaagattgaccacttctagaggtggcattgttcaatctaaattt
atagggtctcttaggaagagggtggatgagctcctaaatttttcgccaggattgaaggat
gatttttgtaattatttgaactctgggaaatggcctattatggaatctgagagagagaaa
ggtgcaatacttctttcatggtaccttcagtggtttggagtaccggctccatttgtgatt
aagacagcagcggagagaatcaaacctaagctcatgtcatcatctttaactcccttcttg
cgtttgttatttccaagcactcacatcaatgctattggtgagatagataaattcttgtct
tgttag
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