Castanea sativa (European chestnut): 142641042
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Entry
142641042 CDS
T11266
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csaa03036
]
142641042
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csaa04812
]
142641042
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
142641042
Microtubules and associated factors
gamma-tubulin ring complex
142641042
Cytoskeleton proteins [BR:
csaa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
142641042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_DCAF4
NYD-SP28_assoc
PAN2_N
PsbK
bZIP_2
Motif
Other DBs
NCBI-GeneID:
142641042
NCBI-ProteinID:
XP_075671514
LinkDB
All DBs
Position
6:45570311..45578568
Genome browser
AA seq
804 aa
AA seq
DB search
MNLSDPAMALLAASGGDTVKLFDVSVKAGDPCALTYTPSPGCLVNSVKWNHTNLVVASAG
DDKKISLWRKNGQSMGTIPVAGADSGDNIEESITAISFSNKVSRYICSGGSGQVVRIWDL
QRKRCIKWLRGHTNTITGAIYNCKDEHLASISLSGDLILHNLASGARAAELKDPNEQVLR
VLDYSRISRHLLVTAGDDGTVHLWDTTGRNPKVSWLKQHSAPTAGVSFSPSNDKIIASVG
LDKKLYTYDSGSRRPSSCIPYEAPFSSLAFRDDGWTLAAGTSNGRVVFYDVRGKPQPFVV
LHAYSSSEAVTSLCWQRSKPVIVNESNCTTETALVGNAVEDSILMPDPLPSVTSSSLSLS
TVVSSSRNLGRLGASMEASSLIATSSAFASSTLHTSTAEETPHRSHLRAGGTLARLQAPR
SSYNFKDDMEVFSPLVDVQPITPSLDKLWDDHEGTKKDHLLVDKRPPSLLFPSSTRRFPI
ADDSGNDHPIFDWKSSSTSKQDDTRSSFTILGSTPSPSSKSEDSSITPPEAWGGERLSDK
YTHLRQPVPLPSRFGTLASGGQSSGGSMFSGLQDLSSSTSQTSISSLTNSNFGYANFRAK
DVSSNQETSFGFPEHLTSSSTSLSLGTKGITGQTNLDLPGPASSTLPRRFSTYAERISTA
SSFSDGTSLSVGSPKLKKTGAETREELLNNLLAKSDTVAALEPGILPSMNGVISQPQKAQ
QPDAQQGSSFTLQLFQRTLDETLDSFQKSIHEDMRNLHIEILRQFHMQEMEMSSVMSSIL
ENQAELMKEVKSLRKENQQLRQLL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcggatccagcaatggcgttattggcggcaagcggaggagacactgtgaag
ctcttcgatgtttcggtgaaggccggcgatccttgcgctttaacctacactccctctcct
ggttgcttagtcaattcagtcaagtggaaccacaccaatttggttgtggcgagtgctgga
gatgataagaagatctcgttgtggcgtaagaatgggcagagcatggggacgattccggtg
gccggagccgatagtggagacaacattgaggagtctataactgctatcagcttcagcaat
aaggtatccagatacatatgttctggtggaagtggtcaagttgtaagaatatgggatttg
cagaggaaacgatgtattaaatggctgagaggtcataccaatacaataacgggtgcaata
tacaactgcaaggatgagcacttggcttctataagtcttagtggggatctcatacttcac
aaccttgcatcaggtgccagggctgctgaactcaaggatcccaatgaacaggtattgaga
gtgcttgattattcccggattagccgacaccttttggttactgctggtgatgatgggacc
gtacatttatgggatacaacaggtcgcaatccaaaggtttcttggttgaagcagcactcg
gcgccaacagctggtgttagcttttcaccgtccaatgataagataattgctagtgttggt
ctggataaaaagttatacacgtatgactcagggtctagaaggccctcatcttgcattccc
tatgaggcgcctttctcgtcattggcttttagagatgatggctggactcttgcagctgga
acaagtaatggtcgggtggtgttctatgatgtccgtggaaaaccacagccctttgtagtt
ctccatgcttatagtagttcagaggctgttacaagtttatgctggcagagatcaaaacct
gttatcgtaaatgaaagtaattgcactactgagactgctcttgtaggaaatgctgttgaa
gactcaattcttatgcctgacccacttccttctgtgacttcatcgagcctttctctatct
acagtagtatccagttctcgaaatttgggccgattgggtgcctccatggaagcatcttca
cttatagcaaccagcagtgcatttgcatctagcacactccatacgtctactgcagaggaa
acaccacatcgaagccatttaagggcaggtggtacattggcaagattacaagctcctcgt
tctagttataacttcaaggatgatatggaagtgttttcccctcttgtggatgttcagcca
ataacaccctcacttgacaagttgtgggatgaccatgaaggaaccaagaaggatcatcta
cttgtagataagaggcctccatcactgttgtttccttcatccaccaggagattccctatt
gcagatgatagtggcaatgaccatccaatatttgattggaaatccagctcaacttccaaa
caggatgacacccgatcttcctttacaattttgggttcaactcctagtccatcttcaaaa
agtgaagactcctctatcactcctccagaagcttggggtggtgagagattgtctgataaa
tatactcacctacgtcaaccagttcctttgccatctcgttttgggaccttggcctctggt
ggccagtcatcaggagggtcaatgtttagtggattacaagatctttcctcatcaacaagt
cagacgagtattagctccttgacaaactcaaactttggttatgcaaattttcgcgccaaa
gatgtctcttcaaatcaggagacatcatttggatttccagaacacttaacctctagttct
acatctctgtcccttggtacaaaaggcatcaccggacagactaaccttgatttgccaggg
ccagcatcttcgaccctgcctcgaagattttctacttacgcagagagaataagcacagca
tcttccttcagtgatggcacatctctttcagtaggttctccaaaattgaagaaaacagga
gctgaaaccagggaagaacttttgaataacttgttggcaaaatccgatacagtggctgct
ttggaaccaggaattcttccatcaatgaatggagtaatctcacagccccaaaaggcccag
caaccagacgcacagcagggatcctcctttacacttcagctttttcaacgcactcttgat
gaaactcttgattcctttcagaaatccatacacgaagatatgaggaaccttcatatcgaa
attctaagacaattccatatgcaggagatggaaatgtcaagcgtaatgagctcaattttg
gaaaaccaagcagaattaatgaaagaagttaaatcactccggaaagaaaaccagcagctc
cggcaattgctgtaa
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