Castanea sativa (European chestnut): 142641153
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Entry
142641153 CDS
T11266
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142641153
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
142641153
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
DUF2250
Baculo_LEF5_C
Methyltrn_RNA_4
Motif
Other DBs
NCBI-GeneID:
142641153
NCBI-ProteinID:
XP_075671663
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Position
6:complement(41404849..41410722)
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AA seq
387 aa
AA seq
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MEKELVEFFEAAKKAADAAASESADGGAEESRCLDALQQLKNFPVTYQLLVSTQVGKRLR
HLTKHPRKKIQSFASELMEIWKDIVIKETNKNRKNESLDVKDSVKVESVSAGTPKAEKDQ
KPFSVKVEKVSKAESIKVEKIDRNGTPSSEKASMSVGVKRERKFQSVDVVKIEKTDSAEK
VKFEQRTKEEKQASGVKKPSLVPGAPPKLTSMVKSNDSARDKVRESLCQAFSKVSDEADE
DFKDEVNACDPIRVAVSVESLLFEKWGGSLGAQKAKYRSLMFNLRDGNNPDFRRRVLLGH
IKPERLINMNTAEMASDKRQNENKKIEEKALFECERGGQAKATTDQFKCGRCGQRKCTYY
QMQTRSADEPMTTYVTCVNCNNHWKFC
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaactggtggaatttttcgaagcggcgaaaaaagcagcggacgcagctgca
tccgaatcggcggacggaggagctgaggaaagtcggtgccttgatgccttgcagcagctc
aagaattttcctgtcacttatcaacttcttgtctccacccaggttgggaagcgtcttcga
catctcacaaagcatcctaggaagaaaatccaatcatttgcttctgaactgatggagata
tggaaggatatagttataaaggaaacaaacaaaaacagaaaaaatgaaagcttggatgtt
aaggattctgtcaaagttgagtccgtaagtgcagggactcccaaggctgagaaggatcag
aagcccttttctgtgaaggttgagaaagtttcgaaggctgaaagcatcaaggtcgagaaa
atagatcggaatggtacaccaagctcggagaaggcttcaatgtcagttggtgtcaaaaga
gagagaaagtttcaaagtgtagatgttgtcaagattgagaaaactgattcagctgaaaaa
gttaagtttgaacagagaaccaaagaagaaaagcaagcttctggagtgaagaaaccatca
ctagtccctggtgctcccccaaagctgacatcaatggttaaatctaatgattctgcccgg
gacaaagtacgagaaagcctttgccaagctttctctaaagtttctgatgaggctgatgag
gattttaaggatgaagtgaatgcatgcgaccctattagggttgctgtttctgtagagtct
cttctgtttgagaagtggggaggttctctaggggctcaaaaggccaagtatagatcctta
atgttcaatcttagggatggtaacaacccagattttcggagaagggtacttcttggacat
atcaaaccagagaggcttatcaacatgaacacagcagaaatggcaagtgataagaggcaa
aatgagaataaaaagattgaagagaaagcattatttgaatgtgagcgtggagggcaagcc
aaagcaacaactgatcaatttaagtgtggtagatgtgggcaacgcaaatgcacctactac
caaatgcagacacggagtgctgatgaacctatgacaacatatgtaacatgtgtaaactgc
aataatcattggaaattctgttag
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