Castanea sativa (European chestnut): 142641216
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Entry
142641216 CDS
T11266
Name
(RefSeq) THO complex subunit 4B-like
KO
K12881
THO complex subunit 4
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03013
Nucleocytoplasmic transport
csaa03015
mRNA surveillance pathway
csaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142641216
09122 Translation
03013 Nucleocytoplasmic transport
142641216
03015 mRNA surveillance pathway
142641216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142641216
03041 Spliceosome [BR:
csaa03041
]
142641216
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142641216
TREX complex
142641216
Spliceosome [BR:
csaa03041
]
Complex C
Other components
EJC/TREX
142641216
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
142641216
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
142641216
NCBI-ProteinID:
XP_075671734
LinkDB
All DBs
Position
6
Genome browser
AA seq
256 aa
AA seq
DB search
MANKLDMSLDDMIKNSRRSGGYNGNSNSRGRGRSSGPGPGPGPDRRFPNRNFQRTAPYYA
PQGMQVMNPMLTQQVVLGVGGGVGVGVGGGSNINNSEDGTKLYISNLEYGVTNDDIKVLF
CEIGDLKRYSIHYDRSGRSKGTAEVVFLRQADALAAIKRYNNVQLDGKPMKIELVGVNLV
TPPVVPPFPNSILGKPNFAFRRGRPAPGGWVRGGAGGIGGGSARGRARAKGPVEKLSAED
LDADLEKYRLEAMQIN
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagctggacatgtccctcgacgacatgatcaagaatagccgaagatccgga
gggtacaatggtaattctaattcccgtggccgaggccgttcctccggtcccggcccaggc
ccaggcccagaccgccgcttccccaaccgcaactttcaaagaaccgcaccgtactacgct
ccacagggaatgcaagtgatgaatccgatgttgacacaacaagtggtgttgggtgtgggt
ggcggtgttggtgttggtgttggtggtggatctaacattaacaactcagaggacggtacc
aaactatatatatcaaacttagagtacggtgttactaatgacgacattaaggtacttttc
tgtgagattggggacctgaaaagatattcaatccattatgataggagtggaagatcaaag
ggaacggcagaagttgtctttttacgccaggcagatgctctagcagctatcaagagatac
aacaatgttcagctcgatgggaagccaatgaaaattgagcttgtaggagtgaatctggtt
actcctcctgttgtgccaccttttccaaacagcatattaggaaaaccaaattttgccttc
agaagaggaaggcctgctcctggaggttgggttcgtggtggtgctggtggcattggcggt
ggatctgcaaggggccgtgcacgagcaaaaggtcctgttgagaagttgtctgcagaggat
cttgatgctgacttggagaaataccgccttgaagctatgcaaataaattga
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integrated database retrieval system