Castanea sativa (European chestnut): 142641357
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Entry
142641357 CDS
T11266
Name
(RefSeq) putative E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142641357
04121 Ubiquitin system [BR:
csaa04121
]
142641357
Enzymes [BR:
csaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142641357
Membrane trafficking [BR:
csaa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
142641357
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142641357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
HypA
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
SelP_N
zf-HC5HC2H_2
IBR
zf-HC5HC2H
Zn_ribbon_FGT1_2
Rad50_zn_hook
zf-Nse
Motif
Other DBs
NCBI-GeneID:
142641357
NCBI-ProteinID:
XP_075671888
LinkDB
All DBs
Position
6:46586539..46588361
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AA seq
405 aa
AA seq
DB search
METTASYWCYRCSRFVRVSGQDASVTCPECETGFVEAMEEEPPRTVHVDSRRRRIPAAAM
YMIGTPHPHHHHHHHHHGSNNSSQSNSSGPTLRRLRRTGPDRSPFNPVIVLRGGPSDGRE
ARGFELFYDDGSGSGLRPLPTSMSDFLLGSGFDRLLEQLSQIELNGVVARYENPPASKSA
IESMPTIEIDETQVESHCAVCKEQFEFGSEAREMPCKHIYHSDCILPWLLIRNSCPVCRH
ELPTDTETVAAAAPVESTTTAAAAQNGSENVGLTIWRLPGGGFAVGRFSGPRGRIEEREL
PVVYTEMDGGFNNGAAVRRIAWSMRAGGGGGGGVGGGGGGRENGGFGRTVRNLLSCFRGS
NSNSGSGSGSNSDARTTRRRRSVSAGRSRRRRTWSMDASNGAREW
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacggcatcgtattggtgttaccggtgcagccggttcgttagagtttcgggt
caggatgcttcggtaacgtgccccgagtgcgaaaccgggtttgtggaggcaatggaagag
gagccgccccggactgtccacgtggactccaggcgtaggagaatccctgcggccgcgatg
tacatgatcggcaccccacacccccaccaccaccaccatcaccatcaccacggcagcaac
aatagcagccaaagcaacagctctggcccgacgctccgccggctgaggagaaccgggccg
gaccggtctcctttcaacccggttatcgttctccgcggcgggccctctgatggcagagag
gcgcgtgggttcgagctgttttacgacgacggaagcgggtcgggtcttaggccgttgccg
acgagcatgtcggattttctgttggggtccgggttcgatcggcttttggagcaactgtcg
cagatcgaattgaacggcgtcgtcgcgaggtacgagaacccgccggcttcgaagtcggcg
atcgagtcgatgcccacgatcgaaatcgacgagacccaggtagagtctcactgcgctgtt
tgtaaagagcaattcgaattcggatccgaagctcgagaaatgccgtgtaagcatatatac
cactctgattgtatactcccttggcttttgattcggaattcttgcccagtttgtcgccac
gagcttcccactgataccgaaaccgtagcggcggctgcgccggtggagtctacgacgacg
gcggcggcggctcagaatgggtctgagaatgttgggttgacgatttggaggcttcccgga
ggtgggtttgcggtggggaggttttctgggccgagagggagaattgaggagcgagagctt
ccggtggtgtatacggaaatggatggtgggtttaacaatggcgctgcggtgaggcggatt
gcgtggtcgatgagagcgggtggaggaggaggaggaggagtaggaggaggaggaggaggg
cgagagaatggtgggtttggccgtacggtcaggaatttgttgtcctgttttcggggctcg
aattcgaattcgggttcaggttcggggtctaattcagatgccagaacgacaaggaggagg
agatcagtatcggccgggaggtcgaggaggcggaggacttggtctatggatgctagtaat
ggagctagagaatggtga
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