Castanea sativa (European chestnut): 142641558
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Entry
142641558 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142641558
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142641558
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142641558
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
142641558
NCBI-ProteinID:
XP_075672121
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Position
6:complement(16431866..16441109)
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AA seq
686 aa
AA seq
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MASEQEISHASRMHHMTDDDNSNSEEEEEEEELESEDSEVDDEDDDEIEKEGSRGACENM
YFMFGSRRRGRWSWGQVLDPRAKWVQEWNRVFLLVCATGLFVDPLFFYALSISDTCMCLF
IDGWFAITVTVLRCMTDALHVWNMWLHLKMAKRSFAVEGTTGLRDTNARSVALHYLKGKK
GFLFDLFVILPLPQLVLWVAIPSLLEKGDVTTVMTVFLIIFLFQYLPKIYHSVCLLRRMQ
NLSGYIFGTVWWGIALNLIAYFVASHAAGACWYLLGIQRAAKCLKVQCRATNSCGLRILS
CREPIYYGTTRMVSDRATVAWAENKQVRSACLENSPDYDYGAYQWTVQLVTNDSRLEKIL
FPIFWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAM
QLKMRNVEWWMKKRRLPQGFRQRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLC
LDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVL
RDGLKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEADDVKYVT
QHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPVSRCS
SMGEDRLRLYTALLTSPKPNHDDFDF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgagcaagaaatctcacatgcttcacgcatgcaccacatgaccgatgatgac
aacagcaatagtgaagaagaagaagaagaagaagaattagaatcagaagacagcgaagtg
gatgatgaagatgacgatgaaattgaaaaagaaggctctcgtggtgcctgtgaaaacatg
tacttcatgttcgggtctcgccggaggggaaggtggtcatggggacaagtcttggaccca
agagccaaatgggtccaagaatggaacagggtgtttctcctcgtgtgcgccactggtctc
ttcgtagaccctctcttcttctacgctctctctataagcgacacgtgcatgtgcctcttc
atcgatgggtggttcgccatcacagtcaccgtgctacgctgcatgactgacgctttgcac
gtgtggaacatgtggttgcatctcaagatggccaagcggtccttcgctgtggaaggcaca
actgggcttagagacaccaatgctcgctctgtggctctccactacttgaaaggcaagaag
ggatttttgtttgatctttttgtgattcttcctctaccacagcttgtattatgggtggcg
attccctctctgctggaaaaaggagacgttaccaccgtgatgacagtgttcttaatcatc
tttctgttccaatatctaccaaagatctaccactcagtctgtctcttgcgtcgaatgcaa
aacctctctggctatattttcggaactgtttggtggggaatagcccttaacttgattgca
tattttgttgcctcgcatgctgcaggagcatgttggtacttgttaggaatccaaagagct
gcaaagtgtctgaaagtgcaatgcagagcaacaaacagttgtggtttgagaatactgtct
tgtagagaacctatatattatggaacaacacgaatggtgagcgatagagctactgtggct
tgggcagagaacaaacaagtaaggtctgcatgcttagaaaactccccagattatgattat
ggagcttatcaatggacagttcaactcgttacaaatgatagccgcttggagaagatactt
tttcctatcttttggggcctaatgactcttagcacctttggcaacttggaaagcaccaca
gaatggtcagaagtggtcttcaatatcatcgttctaactagtggacttcttttggtgact
atgttgattggaaatatcaaggtgtttctgcacgcaactacgtcaaagaagcaagcaatg
caactgaaaatgaggaatgtagagtggtggatgaagaagaggcgcttgcctcagggattc
aggcaacgagtgcgtaactatgagcggcagcgatgggcagcaatgcgtggtgttgatgag
tgtgagatgattcggaacctccctgagggccttaggagggatatcaaataccatttgtgc
ttggacttggttagacaggtgccattgttccagcacatggatgatctggtcctagagaac
atttgtgaccgagtgaagtccctcatattcaccaagggagaaacaataacaagagagggc
gacccagttcaaagaatgctatttgtagtaaggggtcacttacaaagcagtcaagtgctc
agagatgggcttaaaagttgctgtatgttaggccctggaaacttcagtggggatgagctt
ctttcatggtgcctgagaagaccctttatagaaagactaccaccgtcttcatcaacatta
gtcactcttgaaactactgaagcatttggcctcgaagccgatgatgtgaaatatgttacg
caacattttcggtacacatttgtgaatgagaaggttaagaggagtgctagatattattca
cctggatggagaacttgggcagcagtggcaattcaattggcttggaggaggtataagcac
cggttaacgctaacctctttgtcattcataaggcctagaaggccggtgtctcggtgttct
tcaatgggagaagatagactccggctctatacggctttgttaacttcaccaaaaccaaat
catgatgattttgatttttga
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