Castanea sativa (European chestnut): 142641633
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Entry
142641633 CDS
T11266
Name
(RefSeq) auxin response factor 18-like
KO
K14486
auxin response factor
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142641633
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
142641633
NCBI-ProteinID:
XP_075672219
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Position
6:complement(50831587..50835282)
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AA seq
683 aa
AA seq
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MITVMDSVKEIPMRNSDKSLDSQLWHACAGGMVQMPPINSKVFYFPQGHAEHALGGNVDF
GSSRIPSLIPCRVNTIRYLADPESDEVYAKLKLVPLRNNELDFEDDGFLGASGIDQGQEK
LVSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILVKDVHGGVWKFRHIY
RGTPRRHLLTTGWSNFVNRKKLVAGDSIVFLRAEKGDLCVGIRRAKRGIGGGIEYLSGWN
QEAANCGSTFGVYSSFMRESKNSSKPMELGGKVRNESVVEAATLATNGKPFEVVYYPRAS
TPEFFVKASVVRAAMEIHWSSGMRFKMPFETEDSSRISWFMGTISAVQVADPVRWPDSPW
RLLQVAWDEPDLLQNVKCVNPWLVELVSNIPVMHIPTFSPPRKKMRLPQQADYSLISQFP
MPSFSNNLLHTSSPFCGFSDNIPAGIQGARHAQFGISSEDLLHNNKMHSSLFPIGFQQLD
HAATPPRVPGGNFIDHAERNDASCLLTMGNTTRSLKENNEVKAPHIVLFGQLIFTEEQIS
KSCSGDTIGNSSSDMSPEKAANFSDGSDSVLHQNVSLENSSDGGSPWYKDHRNNDLTLEP
GHCKVFLESVDVGWTLDLSSLGSYEELYVKLAKMFRLESSQILLYQDALGAVKHTGEESF
SEFVKTARRLTVLTDSGSDNIES
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattactgtgatggattctgtgaaagaaataccaatgagaaactccgacaagagcttg
gattctcagctatggcacgcctgtgctggtgggatggttcaaatgccacccattaactca
aaggtcttctatttccctcagggccacgctgaacacgctctgggagggaacgtggacttt
gggagttctcggattccttctttgattccctgcagggtcaatactataagatacctggca
gaccctgagagcgatgaggtttatgctaagttaaagttagtacctttgagaaacaatgaa
ttggattttgaggatgatgggtttttaggagctagtgggattgatcaagggcaagagaaa
cttgtttcttttgctaagactttgacacagtctgatgcaaacaatggtgggggtttctct
gtgcctcgttattgcgcagagacaatctttcctcgtttggattataacgctgagccaccg
gttcagaccattttagtcaaggatgtgcatggtggggtatggaaatttaggcatatttat
agagggacacctcgtcgtcatcttttgactacagggtggagtaattttgtgaatagaaag
aagcttgttgctggggattcaattgtgtttttgagagcagagaagggggatctatgtgtt
gggattaggagggctaaaaggggtattggtggtggaattgagtacttgtctggttggaac
caagaggctgctaattgtggctctacttttggggtatattctagctttatgagagagagt
aagaatagtagtaaaccaatggaattagggggaaaagtgaggaatgaatctgttgtagaa
gctgcaactcttgctactaatggaaagcccttcgaggttgtgtactatccacgtgcaagc
acaccggagttttttgttaaggcctctgttgtgagagctgcaatggaaatccactggtca
tctgggatgaggtttaaaatgccctttgaaactgaggattcctctcggattagctggttc
atgggaaccatatctgctgttcaggtcgccgatcctgtccgttggcctgattctccatgg
cgtcttttacaggtcgcatgggatgagccagatttactccaaaatgtgaagtgtgtcaac
ccatggttggtcgaattggtatcaaacataccagtcatgcatatacctacattctcacca
ccaagaaagaagatgcggcttccacagcaagcagattattccctaatcagccaattccca
atgccatcgttttccaacaacctccttcataccagcagccccttttgtggattttcggac
aatattcctgcaggcatacagggagccaggcatgctcaatttggaatatcttcagaagat
ctcctccacaacaacaaaatgcactcaagtctatttccaattggttttcagcaacttgat
catgctgctacacctcctagagtccctggtggcaactttattgaccatgctgaaaggaat
gatgcatcttgcttgcttacaatggggaatacaacccggagtttgaaagaaaacaatgaa
gtaaaggcgccccacattgtattgtttggtcaactcatcttcactgaggagcagatttct
aaaagctgctctggtgatacaattggaaatagctcatcagatatgagtcctgagaaggcg
gcaaacttctctgatggctctgattcggtgttacatcaaaatgtttcattggaaaattct
tcggatggagggtctccctggtacaaagatcatcgtaataatgatctcactttagagcca
ggtcattgcaaggtttttttagaatcagttgatgttggttggaccctagacctgtccagc
cttggttcgtatgaagaactgtatgtaaagctggccaaaatgtttaggttggagagttca
caaatactgctttaccaggatgcactaggtgctgttaaacacactggagaagaaagcttt
agtgaattcgtgaagactgcaagaaggctaactgttcttacagattcaggcagtgacaac
attgaaagttag
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