Castanea sativa (European chestnut): 142641703
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Entry
142641703 CDS
T11266
Name
(RefSeq) B-type cell cycle switch protein ccs52B
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142641703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142641703
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
142641703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Aladin
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR41
Tricorn_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_IFT122_2nd
Aldo_ket_red
Beta-prop_SPT8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
142641703
NCBI-ProteinID:
XP_075672295
LinkDB
All DBs
Position
6:46877145..46880658
Genome browser
AA seq
483 aa
AA seq
DB search
MDSPQAKKSGLNLPAGMSETSLRLETFSGSTFRAVTNLGSPRTISNLSASPSKSSSCSDR
FIPCRSSSRLHTFGLIDKGSPLKEGGNEVYSRLLRAELFGSDFGSFSNAGPGSPMSPSKN
MLRFKTESSGPNSPYSPSILGYDNGFSSETSTPPKPPRKVPKTPHKVLDAPSLQDDFYLN
LVDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPNDGVCSVQWTREGSYISIGTNLGQ
VQAWDGTQCKKVRTIGGPQTRTRVLAWNSRTLAFGSRDRNILQHDLRVQNDFVSKLIGHK
SEVCGLKWSHDDRELASGGNDNQLLVWNHHSQQPALRLTEHTAAVKAIAWSPHQSGLLAS
GGGTADRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMVWKYPSM
TKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPTPVRDTGLWSLGRT
QIR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggattcacctcaagcgaaaaaaagcgggttgaatctcccggctgggatgtctgagaca
tcactacgcctcgagaccttttcgggttctacttttcgtgctgtgactaacttgggatcg
cctcgaaccatatcgaacttgtcagcatccccttcgaaatcttcgagttgcagtgatagg
ttcataccgtgtagatcttcgtcgaggctgcacactttcgggttgattgataaggggtcg
ccgcttaaagaaggcggaaatgaggtgtattcgaggttgttgagagcggagctttttgga
tctgattttgggtctttttctaatgcaggtccagggtcacctatgagtcctagcaagaac
atgttgaggttcaagaccgagagctcagggcctaattctccttactcgccttcgatctta
ggatatgataatgggttttcttcagagacttccacgcctcccaagccacctcgcaaggtc
cccaagactccccataaggttctagatgctccatcacttcaagatgacttttacttgaac
ctagtggattggtcctcacaaaatgtccttgcagttggattgggaacctgtgtttatcta
tggagtgcatcaaacagcaaagtaacaaagttgtgtgatttgggacctaatgatggtgtg
tgttctgtccaatggacccgagagggttcatacatttccattggtacaaatcttggtcaa
gttcaggcctgggatgggacacagtgcaagaaagtccgaaccataggtgggcctcaaaca
agaacaagggttttggcatggaattcgcgcacattggccttcggaagcagggatcgcaac
atacttcaacatgatcttcgggttcaaaatgacttcgttagcaagctaattggccacaag
tctgaggtatgtgggctaaaatggtcccatgatgacagggaacttgcatctggtggcaat
gataatcagctattggtctggaaccatcattctcagcaaccagctttgagactaacagag
cacacagctgctgtcaaggccattgcttggtcaccccaccaaagtggccttcttgcatct
ggaggtggaacagctgatagatgtattcgcttctggaacaccacaaacggccaccaactg
aacagcgttgacacagggagccaggtttgcaatcttgcatggagtaaaaatgtgaatgaa
atagtaagcactcatgggtattcccagaatcaaattatggtgtggaagtatccatcaatg
acaaaggttgcaactctaacgggacatagtatgcgagtgctttaccttgcaatgtcaccc
gatggtcagactatagttactggtgcaggtgatgaaaccctccggttttggaatgtcttc
ccatccatgaaaacaccaacaccagtgagagacacaggtctttggtctcttgggcgaacc
caaattcgatga
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