Castanea sativa (European chestnut): 142642003
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Entry
142642003 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142642003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142642003
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142642003
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
ADAMTSL1
Ferrochelatase
SecM_small
Motif
Other DBs
NCBI-GeneID:
142642003
NCBI-ProteinID:
XP_075672465
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Position
7:complement(6445183..6455215)
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AA seq
638 aa
AA seq
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MVMSYQILKRTVSVMSYFCHQQGNGARNSQDIERQRLKNGGSDSVKETWTSKTILDPRKA
YLKRWNVGFVLSCMIAVSLDPLFFYLPVINEEKKCIRLDKKLWITAIVMRSFFDIIYLLH
IILQFRTGFIDKKLLKSGKSELNTDAWKIAQKYLWPWFLFDIITILPIPQVVTLTIFSEM
RGTKSSNKVKFLNTIVLFQYVPRVSQIYLSWRKLITNNKKFDRIVLVKASLNFILYILAG
HVLGAFWYFFSTQRLAACWHEACDQHRSRCVGISFDCDHSFGNLSFLNDTCSLNDTKNAT
SFDFGIFLKALQSGVLESEDFPQKLFYSFWWGMRNLSSLGQNLETSNYVWENCFALGISI
FGLVLFLYFMGNLQMYMQWTATKSVKNWDKVRKKMKSSKRQKQQKTMRSWISQRAFNDTI
KREIIRNIDQRFEEDEDVYVENLIPDLPPELQNNVKRHLCLDLLKNLKFVKDNVKQEQLL
LKICDSLKPKFYKEHCYIVQEGDPIDAVFFITEGTVWTCTSSSNGGEDSQHAERLEKNFF
GEELLEWVMKSSSADMYNLSKLPVHSKTLKTHTKVEAFALMASDLKHIWHSKLSRLGPGG
LQYQAASRVQRIWHWHRDHPKPDDAVVESKEPSILQRV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggttatgagttatcagattctcaaaagaactgttagtgttatgagttatttttgccat
caacaagggaacggtgcaaggaatagtcaggacattgagaggcaacgtcttaagaatggt
ggaagtgattcagtgaaagaaacatggacatcaaagacaattcttgatccaaggaaggcg
taccttaaaaggtggaatgtaggatttgtattgtcgtgcatgattgcagtatcattggat
cctctgttcttttatcttcctgtgatcaatgaagaaaagaagtgcattcggttagacaag
aagttgtggatcacagctatcgttatgcgatccttctttgatatcatttacctactgcat
atcatattgcaatttcgcactggttttatagacaagaagcttctgaaaagtggaaaatct
gagttgaatacagatgcttggaaaatagctcagaaatatttatggccgtggttcttattc
gacattataactattcttcccatcccgcaggtggtgactctgactattttttcagaaatg
agaggcacgaaatcttcaaataaagtaaaattcttgaacactattgttctcttccaatat
gtgccaagagtttctcaaatctacctatcttggaggaaactaataacaaataacaaaaaa
tttgatagaatcgtgctggtcaaagcttcattgaatttcattctatacatccttgctggt
catgtattgggagccttctggtattttttctctactcaacgactggcggcttgttggcac
gaagcgtgtgatcaacatcgtagtagatgtgttggaatttcttttgattgtgaccacagt
tttggaaatctgtcttttttaaatgatacttgctctttaaatgatactaaaaatgcaacg
tcctttgactttggaatatttcttaaagcccttcaatctggtgtcttagaatctgaagat
tttccacaaaaattattttacagtttctggtggggcatgcgaaatctgagttctcttggt
caaaaccttgaaacaagtaactacgtatgggaaaactgctttgcacttggtatttccatc
tttggattggtactatttctatatttcatgggaaatttgcagatgtacatgcagtggaca
gctacaaaatctgttaaaaattgggataaggtacgcaagaagatgaagtcgagtaaacga
caaaaacaacaaaaaaccatgagatcttggatttcccaacgggcctttaatgataccatt
aaaagagagattataaggaacatagatcagagatttgaagaagacgaagatgtttatgtg
gagaacctgatacctgatcttcctccagaacttcaaaacaatgtcaagcgtcatctctgc
ttagatcttctaaagaatctgaagttcgtaaaagacaatgttaagcaagaacaactgttg
cttaagatctgcgactctctcaaaccaaagttctacaaagagcactgctacattgttcag
gagggagacccaattgatgcggttttttttattacggaaggcactgtatggacttgcaca
agcagtagtaatggtggtgaagactcccaacatgctgagcggcttgaaaaaaatttcttt
ggagaagaacttcttgaatgggttatgaaatcttcctcagcagacatgtacaacctatct
aaactccccgttcattcaaaaacactcaaaacccacacaaaagtggaagcctttgctcta
atggcctccgacttgaagcacatatggcattctaagttgtcgcgattaggccccggagga
ttgcaataccaggccgcttcccgtgtacaacgaatttggcactggcaccgcgatcaccca
aagccggatgatgctgttgttgaatcgaaggaaccttctattttacaacgagtctga
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