Castanea sativa (European chestnut): 142642411
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Entry
142642411 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142642411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142642411
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142642411
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GFIT
Motif
Pfam:
cNMP_binding
S1FA
Ion_trans
Motif
Other DBs
NCBI-GeneID:
142642411
NCBI-ProteinID:
XP_075672873
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Position
7:complement(6370299..6387880)
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AA seq
642 aa
AA seq
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MNSHSHQRGNGAGINDIEEQASEDGKAVAVKESTTEKTSSDSGGNSLPWDWNRIIKWVNS
LPWDWNIIVILVRMIALSLEPLFLYGLMINEYKKCVEIDRRLGITAIVSRSFLDISYLVL
RFHTGFLGGLFRKYRRKLKNKLHRERKGAASGQMETMAPTGPIDSSHSTPVKDLRKYFLH
QHLLFDILVFLPIPQVVMLCILLDVRAMKSLKTLQILNIFIFFQYWPRVFQIYLPRKDLG
SNHEILGGRLWVLGPLDFFLYIIAGHVLGAFWYCFSIQRTVACWYRACENHDGCVRNSFY
YCDHNFGYHSALDDFCPKNMPNAELFDFGVYLDAHQSYILESKNIPQKIFYCFCWGMRHL
SSFGSNLRTSNDVWENCFVLCVTIFGLLLFLYYMGNFQIYLQRRITSKSKAEAAKRKEKN
IKLWIENKKLRTDTSNEITKIMEKKFHEEEDIYVEILISELPSQLQSDVKNQICFDPLQR
LMIEKNNSLANPEHENLLCDICNSLKPVYYNEQCYIVREGEPMDAVFLITDGSAWAFPSN
TNGEGIGTASRHAERLKAGDFFGEELFELVREPYSPNMFNLPKVPIYSKSLKTHTKVEAF
ALMANDLASAVEKKLLNPAEPNDIVECPKCWCFKKTPKFSGT
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcattcacatcagcgagggaatggtgcggggataaatgatatcgaagagcag
gcttcagaggatggcaaagctgtagcagtgaaagaatctacgacggaaaagacaagttcg
gactcaggagggaattctcttccatgggattggaatagaataattaaatgggtaaattct
ctcccatgggattggaatataatagttatattggtgcgcatgatcgcattatcactggaa
cccttgttcttgtatggtcttatgatcaatgaatacaagaaatgcgttgagatagacaga
aggttggggatcacagctatagtttcgcgatctttccttgatatcagttacctagtgctg
cgatttcatactgggtttttaggcggcctatttcggaaatatagaagaaaattaaaaaat
aagttacacagagaaagaaaaggagccgcgtcaggacaaatggagaccatggcccccact
ggcccaatcgactcctcccactcaacacctgttaaagatctcagaaaatatttcttgcat
caacaccttctatttgacattttagtttttcttcccatcccacaggtggtaatgttatgc
atactcttagacgtgagagccatgaaatctttaaaaacattacagatcttaaacattttt
attttcttccaatattggccaagagtttttcaaatttacctaccaaggaaggatctggga
tcaaatcatgagatacttggtggaaggctatgggtcctaggtccactggatttctttcta
tacatcattgccggccatgtattaggagccttttggtattgtttctctattcaacgaact
gtggcttgctggtacagggcgtgtgaaaatcatgatggatgtgtccgaaattctttttat
tactgcgaccacaactttggctatcactctgctttagatgatttttgccctaaaaatatg
ccaaatgcagagctctttgattttggagtatatctcgatgctcatcagtcttatatctta
gagtccaaaaatattccacaaaaaatattctactgtttctgttggggcatgcgacatctg
agttcttttggttcaaacctccgaacaagtaacgatgtatgggaaaactgctttgtactt
tgcgttactatctttggcttgttactatttctatattacatgggaaattttcagatatac
ttgcagcggcggataacttcaaaatcaaaagcagaagctgcgaaaagaaaagaaaaaaac
attaaattgtggattgaaaataaaaagctccggacggatacaagcaatgaaattactaag
atcatggaaaagaaatttcacgaagaagaagatatttatgtggagatcctgatctctgaa
cttccttcacaacttcaaagcgatgtcaagaaccaaatctgctttgatccgctacagcgc
ctcatgatagaaaaaaacaatagcttggctaaccctgagcatgaaaatttgttgtgtgac
atctgcaactctctcaagccagtgtactacaacgagcagtgctacattgttcgggaggga
gagcctatggatgcggtattcttgattacagacggcagtgcatgggcctttccaagcaac
actaatggtgaaggaataggaactgcctcccgacatgctgagcgtcttaaagcaggtgac
ttctttggagaagaactttttgaattggttagggaaccttactcccccaacatgttcaat
ctacccaaagttcccatttactcaaaatctctcaaaacccatacaaaagtggaagccttt
gctctaatggccaacgaccttgcatcggcggttgaaaaaaaacttctgaatccagcagag
cctaatgatattgttgaatgcccaaagtgttggtgcttcaagaaaacgccaaaatttagc
ggtacctga
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