Castanea sativa (European chestnut): 142642436
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Entry
142642436 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142642436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142642436
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142642436
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Motif
Pfam:
cNMP_binding
LMBR1
S1FA
Motif
Other DBs
NCBI-GeneID:
142642436
NCBI-ProteinID:
XP_075672900
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Position
7:complement(6793227..6805972)
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AA seq
418 aa
AA seq
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MLCILLDVRAMKSLKTLQILNIFIFFQYWPRVFQIYLPRKDLGSNHEILGGRLWVLGPLD
FFLYIIAGHVLGAFWYCFSIQRTVACWYRACENHDGCVRNSFYYCDHNFGYHSALDDFCP
KNMPNAELFDFGVYLDAHQSYILESKNIPQKIFYCFCWGMRHLSSFGSNLRTSNDVWENC
FVLCVTIFGLLLFLYYMGNFQIYLQRRITSKSKAEAAKRKEKNIKLWIENKKLRTETSNE
ITKIMEKKFHEEEDIYVEILISELPSQLQSDVKNQICFDPLQRLMIEKNNSLANPEHENL
LCDICNSLKPVYYNEQCYIVREGEPMDAVFLITDGSAWAFPSNTNGEGTGTASRHAERLK
AGDFFGEELFELVREPYSPNMFNLPKVPIYSKSLKTHTKVEAFALMANDLASAVEKNF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttatgcatactcttagacgtgagagccatgaaatctttaaaaacattacagatctta
aacatttttattttcttccaatattggccaagagtttttcaaatttacctaccaaggaag
gatctgggatcaaatcatgagatacttggtggaaggctatgggtcctaggtccactggat
ttctttctatacatcattgccggccatgtattaggagccttttggtattgtttctctatt
caacgaactgtggcttgctggtacagggcgtgtgaaaatcatgatggatgtgtccgaaat
tctttttattactgcgaccacaactttggctatcactctgctttagatgatttttgccct
aaaaatatgccaaatgcagagctctttgattttggagtatatctcgatgctcatcagtct
tatatcttagagtccaaaaatattccacaaaaaatattctactgtttctgttggggcatg
cgacatctgagttcttttggttcaaacctccgaacaagtaacgatgtatgggaaaactgc
tttgtactttgcgttactatctttggcttgttactatttctatattacatgggaaatttt
cagatatacttgcagcggcggataacttcaaaatcaaaagcagaagctgcgaaaagaaaa
gaaaaaaacattaaattgtggattgaaaataaaaagctccggacggaaacaagcaatgaa
attactaagatcatggaaaagaaatttcacgaagaagaagatatttatgtggagatcctg
atctctgaacttccttcacaacttcaaagcgatgtcaagaaccaaatctgctttgatccg
ctacagcgcctcatgatagaaaaaaacaatagcttggctaaccctgagcatgaaaatttg
ttgtgtgacatctgcaactctctcaagccagtgtactacaacgagcagtgctacattgtt
cgggagggggagcctatggatgcggtattcttgattacagacggcagtgcatgggccttt
ccaagcaacactaatggtgaaggaacaggaactgcctcccgacatgctgagcgtcttaaa
gcaggtgacttctttggagaagaactttttgaattggttagggaaccttactcccccaac
atgttcaatctacccaaagttcccatttactcaaaatctctcaaaacccatacaaaagtg
gaagcctttgctctaatggccaacgaccttgcatcggcggttgaaaaaaacttctga
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