Castanea sativa (European chestnut): 142642668
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Entry
142642668 CDS
T11266
Name
(RefSeq) histone deacetylase 19-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03082
ATP-dependent chromatin remodeling
csaa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142642668
03083 Polycomb repressive complex
142642668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csaa03036
]
142642668
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
142642668
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
142642668
HDAC complexes
Sin3A-HDAC complex
142642668
BRAF-HDAC complex
142642668
REST complex
142642668
SHIP complex
142642668
MiDAC complex
142642668
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
142642668
Heterochromatin formation proteins
Other heterochromatin formation proteins
142642668
Chromatin remodeling factors
NuRD complex
142642668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
142642668
NCBI-ProteinID:
XP_075673184
LinkDB
All DBs
Position
7:complement(47572537..47584221)
Genome browser
AA seq
493 aa
AA seq
DB search
MDSGAGGGGNSLPSGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL
QNMQVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYS
FCQTYAGGSVGGAVKLSHGHCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE
RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPL
DDGIDDESYHFLFKPIIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFM
RSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPS
NMENKNSRQLLDEIRAKLLDYLSKLQHAPSVQFQERPPDSELPEADEDEDEDDDDRDGTW
EGDFDKLPSRVKREMVEPELKDLEGQKTNAENARGFNTAAEETICAKALDVDSFSVDEPS
VKVEQENVNKPFD
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggatagtggagctggaggaggaggcaattccctaccatcgggaccagatggtgtgaag
agaaaagtgtgttatttctacgacccggaggtggggaattactattatggccagggtcat
cctatgaagcctcatcgtatcagaatgacccatgctcttcttgcccactatggtttgctt
cagaacatgcaggttctcaagccctttcctgcccgggatcgtgatctctgccgctttcat
gccgatgattatgtttctttccttcggagtattactcctgaaacccagcaggatcagctc
aggcaactcaagcgcttcaatgttggtgaagactgccccgttttcgatggtctctactct
ttctgtcaaacttatgctggtggttccgttggtggtgctgtcaagttaagtcatggtcat
tgtgatattgctatcaactgggctggtggcttgcatcatgccaagaagtgtgaggcttct
ggtttttgttatgtcaatgatattgtccttgctattttggagcttcttaaacagcacgag
cgtgttttatatgtggatattgatattcaccatggagatggtgtggaggaggcattttac
acaactgatagggtcatgactgtttcattccacaaatttggagattattttcctggtaca
ggggacatacgtgacattggatatggaaaggggaaatactactcccttaatgttccgctt
gatgacgggattgatgatgagagctaccatttcttgttcaaaccaatcattgggaaggtg
atggaaatttttaggcctggtgctgtagttctacagtgtggtgctgactctttgtctgga
gatagattaggatgcttcaatctctctatcaaaggtcatgcagagtgtgtaagatttatg
agatctttcaatgtgccactgttgcttctgggtggtggtggttataccattcggaatgtt
gctcgctgctggtgctacgagacaggggttgcacttggagttgaagttgatgacaagatg
ccacagcatgagtattatgagtattttggtccagattatacccttcatgttgccccaagt
aacatggaaaataaaaattcgcggcaattattggatgaaatacgggctaaacttcttgat
tatctctcaaagcttcagcatgctcccagtgtccaatttcaggaaagacctcctgattct
gaacttccagaggcagatgaagatgaagatgaagatgacgatgatagagatgggacatgg
gaaggagattttgacaagttaccaagtagagtaaagagagaaatggttgaaccggaactc
aaagatctggagggtcaaaaaacaaatgcagagaatgccagaggcttcaatacagcagca
gaagagaccatatgcgcaaaggctttagatgtggattctttttcagttgatgagcccagc
gtgaaagttgaacaagagaatgtgaataagccatttgattag
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integrated database retrieval system