KEGG   Castanea sativa (European chestnut): 142642668
Entry
142642668         CDS       T11266                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03082  ATP-dependent chromatin remodeling
csaa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    142642668
   03083 Polycomb repressive complex
    142642668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csaa03036]
    142642668
Enzymes [BR:csaa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     142642668
Chromosome and associated proteins [BR:csaa03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     142642668
   HDAC complexes
    Sin3A-HDAC complex
     142642668
    BRAF-HDAC complex
     142642668
    REST complex
     142642668
    SHIP complex
     142642668
    MiDAC complex
     142642668
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     142642668
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    142642668
  Chromatin remodeling factors
   NuRD complex
    142642668
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 142642668
NCBI-ProteinID: XP_075673184
LinkDB
Position
7:complement(47572537..47584221)
AA seq 493 aa
MDSGAGGGGNSLPSGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL
QNMQVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYS
FCQTYAGGSVGGAVKLSHGHCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE
RVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPL
DDGIDDESYHFLFKPIIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFM
RSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPS
NMENKNSRQLLDEIRAKLLDYLSKLQHAPSVQFQERPPDSELPEADEDEDEDDDDRDGTW
EGDFDKLPSRVKREMVEPELKDLEGQKTNAENARGFNTAAEETICAKALDVDSFSVDEPS
VKVEQENVNKPFD
NT seq 1482 nt   +upstreamnt  +downstreamnt
atggatagtggagctggaggaggaggcaattccctaccatcgggaccagatggtgtgaag
agaaaagtgtgttatttctacgacccggaggtggggaattactattatggccagggtcat
cctatgaagcctcatcgtatcagaatgacccatgctcttcttgcccactatggtttgctt
cagaacatgcaggttctcaagccctttcctgcccgggatcgtgatctctgccgctttcat
gccgatgattatgtttctttccttcggagtattactcctgaaacccagcaggatcagctc
aggcaactcaagcgcttcaatgttggtgaagactgccccgttttcgatggtctctactct
ttctgtcaaacttatgctggtggttccgttggtggtgctgtcaagttaagtcatggtcat
tgtgatattgctatcaactgggctggtggcttgcatcatgccaagaagtgtgaggcttct
ggtttttgttatgtcaatgatattgtccttgctattttggagcttcttaaacagcacgag
cgtgttttatatgtggatattgatattcaccatggagatggtgtggaggaggcattttac
acaactgatagggtcatgactgtttcattccacaaatttggagattattttcctggtaca
ggggacatacgtgacattggatatggaaaggggaaatactactcccttaatgttccgctt
gatgacgggattgatgatgagagctaccatttcttgttcaaaccaatcattgggaaggtg
atggaaatttttaggcctggtgctgtagttctacagtgtggtgctgactctttgtctgga
gatagattaggatgcttcaatctctctatcaaaggtcatgcagagtgtgtaagatttatg
agatctttcaatgtgccactgttgcttctgggtggtggtggttataccattcggaatgtt
gctcgctgctggtgctacgagacaggggttgcacttggagttgaagttgatgacaagatg
ccacagcatgagtattatgagtattttggtccagattatacccttcatgttgccccaagt
aacatggaaaataaaaattcgcggcaattattggatgaaatacgggctaaacttcttgat
tatctctcaaagcttcagcatgctcccagtgtccaatttcaggaaagacctcctgattct
gaacttccagaggcagatgaagatgaagatgaagatgacgatgatagagatgggacatgg
gaaggagattttgacaagttaccaagtagagtaaagagagaaatggttgaaccggaactc
aaagatctggagggtcaaaaaacaaatgcagagaatgccagaggcttcaatacagcagca
gaagagaccatatgcgcaaaggctttagatgtggattctttttcagttgatgagcccagc
gtgaaagttgaacaagagaatgtgaataagccatttgattag

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