Castanea sativa (European chestnut): 142643009
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Entry
142643009 CDS
T11266
Name
(RefSeq) putative ubiquitin-conjugating enzyme E2 23 isoform X1
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142643009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142643009
Enzymes [BR:
csaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
142643009
Ubiquitin system [BR:
csaa04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
142643009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-B_UBE2O
UQ_con
SH3-C_UBE2O
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
142643009
NCBI-ProteinID:
XP_075673640
LinkDB
All DBs
Position
7:complement(42814939..42823851)
Genome browser
AA seq
1153 aa
AA seq
DB search
MANEQDDTVRKVDEPATSAHDINNSSKQGGSMPSGLVYDPNVDSESNEVCTPNDATSYKH
NIPYIYRQDVVLNNSKNKIGIVTEASGDTDSDSSITDEEDDDDGDDDDDGDENEEEDGDG
NSISNGNSDWDRGGGKSGPLLADQVRVLWIDETESTENIHDVTVVDRGFLHGDFVASASD
PTGQVGVVVDVNISVDLLAPDGSTIQGVSSKDLKRVRDFTVGDYVVLGPWLGRIDDVLDN
VTVLFDDGSVCKVSKAEPLRLKPISKNILEDGHFPYYPGQRVRASSSSVFKNSRWISGLW
KATRLEGTVTKVTVGSVFIYWIASAGYGPDSSTAPAEEQSPKNLKLLSCFAHANWQLGDW
CLFPSLALSSSNPLDKGLSKLELHDSANGELDSTQMGSGCDSEEVSLEESTGNTESMDLD
PVAAVDGNDKNGERNEPESSSCGSSLSVLKEPVHESWPLHRKKIRKVVVRRDKKARKKEE
SYERALLIVNSRTKVDVAWQDGTTGCRLDSTRLIPIDSPGDHEFVAEQYVVEKASDDGDD
VGEARRVGVVKSVNAKERTACVRWLKPVARAEDPREFDKEEVVSVYELEGHPDYDYCYGD
VVVRLSPVSVPAETASGVDSAEETKHQNGPNEVKRDMKKRSGSKKVDDASGSKASNNFTD
LSWVGNITGLKNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESMAAGSEVSDDAASWETV
NDDEMDTLENAQEEDGQHNVTDIDINSDLEESGENSGKNSAFSVPLAALRYVTKLATGIF
SRGQKNLDPSCLDSKVEIELESEKTIKISEVKAPSDESSSQKLNEIDQCGMEIKEEVTPE
AQEVFEAAEALCDLSADSAEESYPPACSDYDNTCSFKHFDTAKDPLDHYFLGAYGQNNNG
RRWFKKVQQDWSILQNNLPGTIYVRVYEDRMDLLRAVIVGAYGTPYQDGLFFFDFHLPPE
YPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGKGNEVWDPKSSSILQVLVSLQGL
VLNSKPYFNEAGYDKQIGTAEGEKNSLSYNENTFLLNCKTMMYLLRKLPKDFEELVKDHF
RKRGYYILKACDAYMKGYLIGSLTEDASVSNKSNANSTSVGFKLMLAKIVPRLFLALSEV
GADCDEFRHLQQS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgaacaggatgacactgtccgtaaagttgatgagcctgccactagtgctcat
gatattaataactcttctaaacaaggtggttcgatgccaagtgggcttgtttatgatcca
aatgtagatagtgaaagcaatgaagtttgcacacctaatgatgctaccagttacaagcat
aacattccatatatttataggcaagatgttgtgttgaacaatagcaaaaataaaattggg
atagtaactgaagcttctggggatacagattcagatagcagcattactgatgaagaggat
gatgatgacggggatgacgacgatgatggtgatgaaaatgaggaagaagatggtgatgga
aatagtatttccaatggcaatagtgattgggacagaggtggtggaaagagtggtcctctt
ctagctgatcaggttcgagtactttggattgatgaaactgagtcgactgaaaatattcat
gatgtaacggttgttgatcgtggattcttacatggagattttgttgcttctgcttcagac
ccaactgggcaagtgggtgttgtggttgatgttaatatctctgttgatttgttagctcct
gatggatctactatacaaggtgtttcatccaaagacttgaaacgcgtgagggatttcact
gtgggtgactatgtggtccttggtccctggctaggtagaattgatgatgttttagataat
gtgactgtgttgtttgatgatggttctgtttgtaaagtttcgaaagctgagccactccgt
ctaaaaccaatttccaagaatatccttgaagatgggcattttccatattatccaggccaa
cgtgtaagggccagttcttcatcagttttcaagaattctaggtggatatctggcttgtgg
aaagctactcggttggaaggtaccgttacaaaggttacggttggatcagtttttatttat
tggatagcatctgctggctatggacctgattcttccactgcccccgccgaggagcagagt
ccaaagaacttaaaactgctatcctgttttgctcatgcaaattggcaattgggtgactgg
tgtctttttccatcattggcactttcatcctccaatcccttagacaaaggtttatcaaaa
ttagaacttcatgattctgccaacggagaattagattccactcaaatgggaagtggttgt
gattcagaagaggtttcattggaggaatcaactggaaatactgaatccatggatcttgat
ccagttgctgcagtggatggaaatgataaaaatggtgaaagaaacgagcccgagtctagc
tcttgcggtagttcattgtcagttttgaaggagcctgtccatgaatcttggcctcttcat
cgcaagaagatccgtaaagttgtggttaggagggacaagaaggctcgaaagaaagaggaa
agttatgaaagagcccttttgattgtcaattctaggacaaaagttgatgtggcatggcag
gatggaacgacaggttgcagactggattcaacaaggttaattcctattgatagtcctggt
gatcatgaatttgttgccgaacagtatgtggtggagaaggcctctgacgatggtgatgat
gttggcgaagccaggcgtgttggggttgtgaaaagcgtcaatgcgaaggagcgaactgcc
tgtgtgaggtggctaaagcccgttgcccgagcagaagaccctcgagagtttgacaaggag
gaagttgtaagcgtctatgaattggaagggcatccagattatgattactgctatggggat
gtagttgttcgattgtctccagtttctgttcctgcagaaacagcttctggtgtggactct
gctgaggaaacaaagcatcaaaatggaccaaatgaggttaaacgggatatgaaaaagcgc
tcaggaagtaagaaagttgatgatgcatctggaagtaaagcttctaataacttcacagat
ctctcttgggttgggaatataactggtctcaagaatggtgatattgaagtcacatgggca
gatgggatggtttcaacggttggacctcaagcaatatatgttgttggtcgagatgatgat
gatgagtcaatggctgctgggagtgaagttagtgatgatgctgctagttgggaaacggta
aatgatgatgagatggacacccttgagaatgctcaagaggaagatgggcagcataatgtc
actgacattgacatcaactctgaccttgaagaaagtggagagaattctggcaaaaattca
gcattttcagttcccttagctgcactacgatatgtaacaaaactggccactggaattttc
tcacggggacaaaagaatttagatccaagctgtttggattccaaagttgaaattgagctt
gaatccgagaagacaataaagatttctgaggtaaaagctcctagtgatgagtctagctct
cagaaattaaatgaaattgatcaatgtggtatggaaataaaagaagaggtcaccccagag
gcccaagaagtgtttgaagcagcagaagctttatgcgacttaagtgccgattctgctgaa
gaatcatatcctccagcatgttctgattatgataatacttgcagtttcaaacactttgat
acagctaaagatcccttggaccattatttccttggtgcatatggacagaataacaatgga
aggaggtggtttaagaaggttcaacaagattggagcatactacagaataacctacctggt
acaatctatgtaagagtttatgaagatcgaatggatctcttaagggcagttatagttggg
gcatatgggacgccttaccaggatggcctcttcttctttgattttcaccttccaccagag
taccctgatgttccaccatcagcatactatcattctggtggctggcggataaatccaaat
ttatatgaggaaggcaaggtgtgccttagccttttaaatacatggactggcaaaggaaat
gaagtctgggatccaaagtcttctagtatcttacaagtgctagtttcactccaaggatta
gtgctaaattctaagccatattttaatgaagctgggtatgataagcagattgggacagct
gaaggagagaaaaattcattgtcatacaatgagaatactttcttgctgaactgcaagaca
atgatgtatcttttgaggaagctacccaaggactttgaagagcttgtcaaagaccatttc
aggaagcgtggttattacatccttaaggcctgtgatgcatatatgaaaggttatttaata
ggctccctcacagaggatgcctctgtaagcaataagagcaatgccaattcaacttcagtt
ggtttcaagctgatgttagcaaagatagtgccgagacttttcttggcactcagcgaagtt
ggagctgattgtgatgagtttaggcatctgcagcagtcttaa
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integrated database retrieval system
