Castanea sativa (European chestnut): 142643021
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Entry
142643021 CDS
T11266
Name
(RefSeq) auxin response factor 19-like
KO
K14486
auxin response factor
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142643021
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
142643021
NCBI-ProteinID:
XP_075673658
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Position
7:complement(2357204..2365794)
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AA seq
1132 aa
AA seq
DB search
MKVPQNGFLPNSGEGEKKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
TDFIPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLLPVNKYDKEALLASDMGLKQSK
QPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELGARDLHDSSWTFRH
IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVIS
SDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMF
ETEESGVRRYMGTITGISDLDTVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVTP
FYICPPPFFRPKFPRQPGMPDDESDIENAFKRAMPWLGDEFGMKDAPSSIFPGLSLVQWM
SMQQNNQFSAAQSGLFPSMVSSNGLHNNLNADDPSKLLSFQAPAMSASNLQFNKANPQNQ
VSQLQQSPVAWPQQQHLQQLLQNSNSQQQQQQQQRQMQHQELHQLSQQQQQQQVQQQQPQ
QQQRQLQQQQQQQQQQQQICHPALVNNGVVTPNQIPNQSLQQPVAYSQLQQQQILTSNTQ
SQQSINSNSKSSLHMTSLPLDSQFQQQIEPQPNLLQRHQQQAQLQQSPLPLLQQSLSQRA
QQQPQMQQLSQQCLSEQQLQFQLLQKMQQQQQQQQQQQQQHQHQHQQLLSPASPILQPQL
LQQQQPNQQNQQVQQIPLSQHQQQQHQQLSSTSFSTEKLLNGNSFSTSALMQSQQIPVNQ
PQSQHKPLTAIRAHSGLTEGDAPSCSTSPSTNNCQVSPSNLLNRNQQGSAMLVGDSLIEP
PSNLIQELQSKSDIRIKHELPSSKGPDQIKYKSTITDQLEASSSGTSYCLDASIPQNFPI
PTFGLEGDVQSHPRNNLPFATNIDGLAPDTLLSRGYDSQKDLQNLLSNYGGTPRDIETEL
STAAISSQSFGVPNIPFKPGCSSDVAINDAGVLSNGLWANQTQRMRTYTKVQKRGSVGRC
IDVTRYKEYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCV
QSIKILSSAEVQQMSLDGDLGHVPVSNQACSGTDSGNAWRPYEDNSAASFNR
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttccccaaaatgggtttcttccaaactctggagaaggagagaagaagagtatt
aattcagagttatggcatgcttgtgcgggacctctggtttctttgcctccagttggaagt
cttgtagtttacttccctcaaggccacagtgagcaagttgcagcatctatgcaaaaggag
actgatttcatacccaactacccgaaccttccttcaaagttgatttgcatgcttcataat
gtcacactgcacgcggatcctgaaactgatgaggtctatgcacagatgacccttctacct
gtaaacaaatatgacaaggaagctctactggcatctgacatgggcctcaagcaaagtaaa
caacctgctgaattcttctgcaaaactcttacagctagtgacactagtacgcatggtgga
ttttcagtacctcggcgagcagctgagaagatctttccacctcttgattattcaatgcaa
cctccagctcaggagctaggagcaagagatttgcatgacagttcgtggacattccggcat
atttatcgcggccaaccaaaaaggcacctgttgactacgggttggagtgtctttgttagc
acaaaaaggcttttcgctggagattctgtactttttataagagatgaaaaatcccagctt
ctcttgggtataaggcgtgctaatagacagcagccagctctctcttcatcagtcatatct
agtgatagcatgcatattggaattcttgcagctgcagctcatgctgctgcaaataacagt
ccatttactatattttacaatccaagggctagcccgtctgagtttgtgattcccttagcc
aagtataacaaagcaatgtatactcaagtttctcttggcatgcgatttagaatgatgttt
gagactgaggagtcaggagtacggagatacatgggtacaattactggtatcagtgattta
gatactgtgcgatggaaaaattctcagtggcgtaaccttcaggttggatgggatgaatca
acagctggtgaacggccaagccgagtgtcaatctgggaaattgaacctgttgtaactcct
ttctacatatgtccacctccatttttcagacccaagtttccaaggcaaccagggatgcca
gatgatgagtctgacatagagaatgctttcaagagagccatgccctggcttggagatgag
tttggcatgaaggatgcccctagctcaatctttcctggtttgagtttagtacagtggatg
agcatgcagcaaaataatcagttttcagctgctcaatctggacttttcccatcaatggtt
tcttcaaatggcttgcataataaccttaatgctgatgatccatctaaattattgagtttt
caagcccctgcgatgtctgcgtcaaatctccagtttaacaaagcaaatccacaaaaccag
gttagccaattgcaacagtcacctgttgcatggccccaacagcagcatctgcagcaacta
ttacagaattctaatagccaacagcagcagcagcagcagcagcggcagatgcaacatcaa
gaactacatcagctgtcccagcagcagcagcagcagcaagtacagcaacagcagccacaa
cagcaacaacgacaactgcagcaacaacaacaacagcagcagcagcagcagcagatatgt
catccagctcttgtaaacaatggtgtagttacccctaaccagatcccaaatcaaagcttg
cagcaaccagttgcatactctcagcttcaacaacagcaaatactcacaagcaatacccaa
tcacagcagagtatcaactctaatagtaaaagttcattgcacatgacatccctaccacta
gactcgcagtttcaacaacaaattgaaccgcaaccaaatctcttacaaaggcaccagcag
caggcacagttacaacagtccccactaccattgttgcaacaaagcctgtcacagcgagca
cagcagcagccacaaatgcaacagttgtcacaacaatgcctttcagagcagcagcttcaa
tttcagctgctacaaaaaatgcaacagcaacagcaacagcaacagcagcagcagcaacag
catcagcatcagcatcagcaattgctttccccagcaagcccaattttgcagcctcagctg
ctacagcaacagcagcccaatcagcaaaatcagcaagtacaacagattcctttgtctcaa
catcagcaacaacaacatcaacagctaagcagcactagcttctcaacagaaaagcttctc
aatggtaatagcttctcaacttctgcactgatgcaatcacaacagattcctgtgaaccag
ccccaaagccagcacaagccacttacagcaatcagagctcattctggtcttacagaagga
gatgctccttcatgttcaacctcaccttccactaataattgccaggtttccccatccaac
cttctgaacagaaaccaacaaggatcagccatgttggtgggggattcattaatcgagcct
ccaagtaatctgattcaggagctgcagagcaagtccgatatacggattaaacatgagttg
cccagctcaaaaggaccagaccagataaaatataaaagtaccatcactgatcagttggaa
gcatcctcttcagggacatcatattgtctggatgctagcatcccacagaacttcccaatc
ccaacctttggtttagagggtgatgttcaatcacatcctcggaacaatcttccttttgca
actaatattgatgggttggcacctgacactttgttgtcaagggggtatgattctcaaaaa
gatcttcagaacttgctttctaattatggtggtactccaagagatattgagacagagtta
tccactgctgcaatcagctctcagtcatttggggtgccaaacatacctttcaagcccgga
tgttcaagtgatgttgctatcaatgatgctggagttttgagcaacggattgtgggctaac
cagactcaacgtatgcgaacatatacaaaggttcaaaagcgtggctctgtgggaagatgc
attgatgttacccgttacaaagagtatgatgagctcaggcatgatcttgcccgcatgttt
ggaattgaagggcagctagaagatcctcaacggactgactggaaacttgtttatgtggat
catgagaatgatattcttcttgttggggatgacccatgggaggaatttgtaagctgtgtt
cagagcataaagatattgtcgtctgctgaagtacagcagatgagcttggatggagatctg
ggtcatgttccagtgtccaaccaagcttgtagtgggactgacagtggtaatgcatggaga
ccatatgaggataattctgctgcatcatttaatcgataa
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